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Database: UniProt
Entry: L8IB81_9CETA
LinkDB: L8IB81_9CETA
Original site: L8IB81_9CETA 
ID   L8IB81_9CETA            Unreviewed;       195 AA.
AC   L8IB81;
DT   03-APR-2013, integrated into UniProtKB/TrEMBL.
DT   03-APR-2013, sequence version 1.
DT   24-JAN-2024, entry version 40.
DE   SubName: Full=3'-5' exoribonuclease CSL4-like protein {ECO:0000313|EMBL:ELR52467.1};
GN   ORFNames=M91_14347 {ECO:0000313|EMBL:ELR52467.1};
OS   Bos mutus (wild yak).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae;
OC   Bovinae; Bos.
OX   NCBI_TaxID=72004 {ECO:0000313|EMBL:ELR52467.1, ECO:0000313|Proteomes:UP000011080};
RN   [1] {ECO:0000313|EMBL:ELR52467.1, ECO:0000313|Proteomes:UP000011080}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=yakQH1 {ECO:0000313|Proteomes:UP000011080};
RX   PubMed=22751099; DOI=10.1038/ng.2343;
RA   Qiu Q., Zhang G., Ma T., Qian W., Wang J., Ye Z., Cao C., Hu Q., Kim J.,
RA   Larkin D.M., Auvil L., Capitanu B., Ma J., Lewin H.A., Qian X., Lang Y.,
RA   Zhou R., Wang L., Wang K., Xia J., Liao S., Pan S., Lu X., Hou H., Wang Y.,
RA   Zang X., Yin Y., Ma H., Zhang J., Wang Z., Zhang Y., Zhang D., Yonezawa T.,
RA   Hasegawa M., Zhong Y., Liu W., Zhang Y., Huang Z., Zhang S., Long R.,
RA   Yang H., Wang J., Lenstra J.A., Cooper D.N., Wu Y., Wang J., Shi P.,
RA   Wang J., Liu J.;
RT   "The yak genome and adaptation to life at high altitude.";
RL   Nat. Genet. 44:946-949(2012).
CC   -!- SUBCELLULAR LOCATION: Nucleus, nucleolus
CC       {ECO:0000256|ARBA:ARBA00004604}.
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DR   EMBL; JH881736; ELR52467.1; -; Genomic_DNA.
DR   RefSeq; XP_005901222.1; XM_005901160.2.
DR   AlphaFoldDB; L8IB81; -.
DR   SMR; L8IB81; -.
DR   STRING; 72004.ENSBMUP00000025635; -.
DR   Ensembl; ENSBMUT00000029511; ENSBMUP00000025635; ENSBMUG00000019207.
DR   GeneID; 102287061; -.
DR   KEGG; bom:102287061; -.
DR   CTD; 51013; -.
DR   OrthoDB; 297439at2759; -.
DR   Proteomes; UP000011080; Unassembled WGS sequence.
DR   GO; GO:0005829; C:cytosol; IEA:Ensembl.
DR   GO; GO:0000178; C:exosome (RNase complex); IEA:UniProtKB-KW.
DR   GO; GO:0005730; C:nucleolus; IEA:Ensembl.
DR   GO; GO:0031090; C:organelle membrane; IEA:UniProt.
DR   GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR   GO; GO:0006401; P:RNA catabolic process; IEA:Ensembl.
DR   GO; GO:0006396; P:RNA processing; IEA:Ensembl.
DR   CDD; cd05791; S1_CSL4; 1.
DR   Gene3D; 2.40.50.100; -; 1.
DR   Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR   InterPro; IPR039771; Csl4.
DR   InterPro; IPR019495; EXOSC1_C.
DR   InterPro; IPR025721; Exosome_cplx_N_dom.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR003029; S1_domain.
DR   PANTHER; PTHR12686; 3'-5' EXORIBONUCLEASE CSL4-RELATED; 1.
DR   PANTHER; PTHR12686:SF8; EXOSOME COMPLEX COMPONENT CSL4; 1.
DR   Pfam; PF14382; ECR1_N; 1.
DR   Pfam; PF10447; EXOSC1; 1.
DR   SMART; SM00316; S1; 1.
DR   SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR   SUPFAM; SSF110324; Ribosomal L27 protein-like; 1.
PE   4: Predicted;
KW   Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW   Exosome {ECO:0000256|ARBA:ARBA00022835};
KW   Reference proteome {ECO:0000313|Proteomes:UP000011080}.
FT   DOMAIN          66..147
FT                   /note="S1 motif"
FT                   /evidence="ECO:0000259|SMART:SM00316"
SQ   SEQUENCE   195 AA;  21438 MW;  E03D66F02F931E63 CRC64;
     MAPPVRYCIP GERLCNLEEG SPGSGTYTRH GYIFSSLAGC LTKTSENGAL PVISVMRETE
     SQLLPDVGAI VTCKVSSINS RFAKVHILYV GSTPLKNSFR GTIRKEDVRA TEKDKVEIYK
     SFRPGDIVLA KVISLGDAQS NYLLTTAENE LGVVVAHSES GVQMVPISWC EMQCPKTHTK
     EFRKVARVQP EFLQT
//
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