ID L8JDU0_9GAMM Unreviewed; 822 AA.
AC L8JDU0;
DT 03-APR-2013, integrated into UniProtKB/TrEMBL.
DT 03-APR-2013, sequence version 1.
DT 27-MAR-2024, entry version 44.
DE SubName: Full=ATP-dependent helicase HrpB {ECO:0000313|EMBL:ELR66428.1};
GN ORFNames=C942_04864 {ECO:0000313|EMBL:ELR66428.1};
OS Photobacterium marinum.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC Photobacterium.
OX NCBI_TaxID=1056511 {ECO:0000313|EMBL:ELR66428.1, ECO:0000313|Proteomes:UP000011134};
RN [1] {ECO:0000313|EMBL:ELR66428.1, ECO:0000313|Proteomes:UP000011134}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AK15 {ECO:0000313|EMBL:ELR66428.1,
RC ECO:0000313|Proteomes:UP000011134};
RA Khatri I., Vaidya B., Srinivas T.N.R., Subramanian S., Pinnaka A.;
RT "Genome Assembly of Photobacterium sp. AK15.";
RL Submitted (DEC-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ELR66428.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AMZO01000007; ELR66428.1; -; Genomic_DNA.
DR RefSeq; WP_007464494.1; NZ_AMZO01000007.1.
DR AlphaFoldDB; L8JDU0; -.
DR PATRIC; fig|1056511.3.peg.1685; -.
DR OrthoDB; 9805617at2; -.
DR Proteomes; UP000011134; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR CDD; cd17990; DEXHc_HrpB; 1.
DR CDD; cd18791; SF2_C_RHA; 1.
DR Gene3D; 1.20.120.1080; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR007502; Helicase-assoc_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR010225; HrpB.
DR InterPro; IPR049614; HrpB_DEXH.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR013689; RNA_helicase_ATP-dep_HrpB_C.
DR NCBIfam; TIGR01970; DEAH_box_HrpB; 1.
DR PANTHER; PTHR43519; ATP-DEPENDENT RNA HELICASE HRPB; 1.
DR PANTHER; PTHR43519:SF1; ATP-DEPENDENT RNA HELICASE HRPB; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF08482; HrpB_C; 1.
DR PIRSF; PIRSF005496; ATP_hel_hrpB; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00847; HA2; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Helicase {ECO:0000256|ARBA:ARBA00022806, ECO:0000313|EMBL:ELR66428.1};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741}.
FT DOMAIN 14..177
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 192..368
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT REGION 801..822
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 801..815
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 822 AA; 90527 MW; F3E00A3CB95C53EA CRC64;
MSQLPIDAVL SPLLEQLQSR SQLILKAPPG AGKSTRLPLA ILQQGGIDGR IIMLEPRRLA
ARNIATYLAS QLGEKVGQTI GLRVRGETRI SAATRLEIVT EGVMTRMLQQ DPELEGIGLL
IFDEFHERSI HADTSLALAL EVQEALRDDL KLLVMSATLD AEALTTLMPE AGYIESEGRC
YPVEHLYKTV VDSKQLLEST AQEIQNLLKS ETGSMLVFLP GAGEIRRLAE LLEERIGADV
LVSPLYGQLS ATQQQQAIMP APQGKRKVVL ATNIAETSLT IEGIRLVVDC GLERIAQWDP
KTGISRLESV RIARSSAEQR AGRAGRLEPG ICLRLYSEEM LARQPAVPQA EIMRADLTGL
AMELAQWGCS DAGELRWLDL PPAPSLAQSR RLLQSLGAMD ERYQLTEKGQ QIQQLGADPR
HAAILLMAKQ HGAAVMTTAA LLVALLEDPP RGMNNPDLHF QLNLLEAGKL PRSGQYHQRA
KQHLTKLTDT KSSALSVAPE WIAPLMAAGF PDRIALSRGG DGRYQLANGQ GAMLLPDEPM
ADEAMLVVAD VVKTRQGDSR IFSAIAADGE QLQDILPHLF VEREWLDWDD KKGRLTAEKH
LCCGQLVLLR TPMGEPDPAK ASEALLNAVV RKGLAVLPWN NRAESLLLRA RCAAEWLPEL
ELPVMDEATL LTEAEQWLLP FMHGMKTLKA LDKLDLVAAL ESRLGWDKAQ ALDAALPTHY
QVPTGSRYPI RYQAGQKPAL AVRMQEMFGE KSSPVIANGK VPVVLELLSP AQRPLQITQD
LAAFWQGSYR EVQKEMKGRY PKHVWPDDPA NHAPTRKTKK YL
//
