ID L8LQD7_9CHRO Unreviewed; 630 AA.
AC L8LQD7;
DT 03-APR-2013, integrated into UniProtKB/TrEMBL.
DT 03-APR-2013, sequence version 1.
DT 24-JAN-2024, entry version 45.
DE SubName: Full=PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:ELR99037.1};
DE Flags: Precursor;
GN ORFNames=GLO73106DRAFT_00028820 {ECO:0000313|EMBL:ELR99037.1};
OS Gloeocapsa sp. PCC 73106.
OC Bacteria; Cyanobacteriota; Cyanophyceae; Oscillatoriophycideae;
OC Chroococcales; Chroococcaceae; Gloeocapsa.
OX NCBI_TaxID=102232 {ECO:0000313|EMBL:ELR99037.1, ECO:0000313|Proteomes:UP000011180};
RN [1] {ECO:0000313|EMBL:ELR99037.1, ECO:0000313|Proteomes:UP000011180}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=PCC 73106 {ECO:0000313|EMBL:ELR99037.1,
RC ECO:0000313|Proteomes:UP000011180};
RX PubMed=23277585; DOI=10.1073/pnas.1217107110;
RA Shih P.M., Wu D., Latifi A., Axen S.D., Fewer D.P., Talla E., Calteau A.,
RA Cai F., Tandeau de Marsac N., Rippka R., Herdman M., Sivonen K.,
RA Coursin T., Laurent T., Goodwin L., Nolan M., Davenport K.W., Han C.S.,
RA Rubin E.M., Eisen J.A., Woyke T., Gugger M., Kerfeld C.A.;
RT "Improving the coverage of the cyanobacterial phylum using diversity-driven
RT genome sequencing.";
RL Proc. Natl. Acad. Sci. U.S.A. 110:1053-1058(2013).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ELR99037.1}.
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DR EMBL; ALVY01000158; ELR99037.1; -; Genomic_DNA.
DR RefSeq; WP_006528138.1; NZ_ALVY01000158.1.
DR AlphaFoldDB; L8LQD7; -.
DR STRING; 102232.GLO73106DRAFT_00028820; -.
DR PATRIC; fig|102232.3.peg.1165; -.
DR eggNOG; COG3706; Bacteria.
DR eggNOG; COG4191; Bacteria.
DR OrthoDB; 9812260at2; -.
DR Proteomes; UP000011180; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR CDD; cd01949; GGDEF; 1.
DR CDD; cd00130; PAS; 1.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 3.30.450.20; PAS domain; 1.
DR InterPro; IPR003018; GAF.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR000160; GGDEF_dom.
DR InterPro; IPR029787; Nucleotide_cyclase.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR000700; PAS-assoc_C.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR013655; PAS_fold_3.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR NCBIfam; TIGR00254; GGDEF; 1.
DR NCBIfam; TIGR00229; sensory_box; 1.
DR PANTHER; PTHR45138:SF9; DIGUANYLATE CYCLASE DGCM-RELATED; 1.
DR PANTHER; PTHR45138; REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM; 1.
DR Pfam; PF13185; GAF_2; 1.
DR Pfam; PF00990; GGDEF; 1.
DR Pfam; PF08447; PAS_3; 1.
DR SMART; SM00065; GAF; 1.
DR SMART; SM00267; GGDEF; 1.
DR SUPFAM; SSF55781; GAF domain-like; 1.
DR SUPFAM; SSF55073; Nucleotide cyclase; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR PROSITE; PS50887; GGDEF; 1.
DR PROSITE; PS50113; PAC; 1.
DR PROSITE; PS50112; PAS; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils}; Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000011180};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 20..43
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 55..76
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 161..222
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 234..287
FT /note="PAC"
FT /evidence="ECO:0000259|PROSITE:PS50113"
FT DOMAIN 494..628
FT /note="GGDEF"
FT /evidence="ECO:0000259|PROSITE:PS50887"
FT COILED 278..309
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 630 AA; 72974 MW; 86578732B6EF8991 CRC64;
MSNPYIPHGH CYLWQTNLVF LHLLSDLVIA IAYYSIPVFL FYFTQQRKDI PFKGIFVLFS
VFILSCGTSH LFGIWTLWHP NYWIAGVIKA FTALVSIYTV FEMIPILPQA LDLPSPSELE
KLNQELIIQV AEKEAVQQEI IKLNYDLDAR IQERTKELEQ SKYFVEKVIN LIPNIVYIYD
LIESRIIYCN NYFTEILGYT SNRLAIEGVK FMTNICHPDD LEIFDYQIVK PDTLKLEYRL
QDIKGEWHWL ENKNYIFTKD DLDKPREIIS IASEITEIKK SESLLLELNQ RLQKQISELQ
IRNQEMTQLG KINDFLQACN NLEEVRLILG DLLKPLFPGY NGAVFMLNQQ NQKMEILVNW
GKYSTTSSSF PTEECWALRR GQVYQANHFY PSLYCSHYQK NPELYETICL PMIAQGQIIG
LLSLSAFKDH FLTAQEINLA ETTATQIALI IANLRLQENL EYQSTRDGLT GLYNRRYLER
IFPQYIIQAA ESEQKLGLMI LDIDYFKRIN DVYGHQAGDL VIQKIAIYLK TNLRSEDIIC
RYGGEEIIAI IPNISLQYLV FKAKQLKTGV SQLKLKYQQE TLPMITASFG VAIFPFHGTD
SNTLINLADK ALYLAKAKGR NRVICAKPNK
//
