ID M0ZK80_SOLTU Unreviewed; 878 AA.
AC M0ZK80;
DT 03-APR-2013, integrated into UniProtKB/TrEMBL.
DT 03-APR-2013, sequence version 1.
DT 27-MAR-2024, entry version 56.
DE SubName: Full=Isoamylase isoform 2 {ECO:0000313|EnsemblPlants:PGSC0003DMT400002502};
GN Name=102577931 {ECO:0000313|EnsemblPlants:PGSC0003DMT400002502};
OS Solanum tuberosum (Potato).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum.
OX NCBI_TaxID=4113 {ECO:0000313|EnsemblPlants:PGSC0003DMT400002502, ECO:0000313|Proteomes:UP000011115};
RN [1] {ECO:0000313|Proteomes:UP000011115}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. DM1-3 516 R44 {ECO:0000313|Proteomes:UP000011115};
RX PubMed=21743474; DOI=10.1038/nature10158;
RG The Potato Genome Sequencing Consortium;
RT "Genome sequence and analysis of the tuber crop potato.";
RL Nature 475:189-195(2011).
RN [2] {ECO:0000313|EnsemblPlants:PGSC0003DMT400002502}
RP IDENTIFICATION.
RC STRAIN=DM1-3 516 R44 {ECO:0000313|EnsemblPlants:PGSC0003DMT400002502};
RG EnsemblPlants;
RL Submitted (JUN-2015) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast
CC {ECO:0000256|ARBA:ARBA00004229}.
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DR RefSeq; XP_006355876.1; XM_006355814.2.
DR RefSeq; XP_015168040.1; XM_015312554.1.
DR AlphaFoldDB; M0ZK80; -.
DR STRING; 4113.M0ZK80; -.
DR PaxDb; 4113-PGSC0003DMT400002502; -.
DR EnsemblPlants; PGSC0003DMT400002502; PGSC0003DMT400002502; PGSC0003DMG400000954.
DR GeneID; 102577931; -.
DR Gramene; PGSC0003DMT400002502; PGSC0003DMT400002502; PGSC0003DMG400000954.
DR eggNOG; KOG0470; Eukaryota.
DR HOGENOM; CLU_011725_2_0_1; -.
DR InParanoid; M0ZK80; -.
DR OMA; WHVSLAS; -.
DR OrthoDB; 610at2759; -.
DR Proteomes; UP000011115; Unassembled WGS sequence.
DR ExpressionAtlas; M0ZK80; baseline.
DR GO; GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
DR GO; GO:0043033; C:isoamylase complex; IEA:EnsemblPlants.
DR GO; GO:0019156; F:isoamylase activity; IEA:EnsemblPlants.
DR GO; GO:0010021; P:amylopectin biosynthetic process; IEA:EnsemblPlants.
DR GO; GO:0019252; P:starch biosynthetic process; IEA:InterPro.
DR GO; GO:0005983; P:starch catabolic process; IEA:EnsemblPlants.
DR CDD; cd11346; AmyAc_plant_IsoA; 1.
DR CDD; cd02856; E_set_GDE_Isoamylase_N; 1.
DR Gene3D; 3.20.20.80; Glycosidases; 1.
DR Gene3D; 2.60.40.1180; Golgi alpha-mannosidase II; 1.
DR Gene3D; 2.60.40.10; Immunoglobulins; 1.
DR InterPro; IPR044096; AmyAc_plant_ISA2.
DR InterPro; IPR044505; GlgX_Isoamylase_N_E_set.
DR InterPro; IPR006047; Glyco_hydro_13_cat_dom.
DR InterPro; IPR004193; Glyco_hydro_13_N.
DR InterPro; IPR013780; Glyco_hydro_b.
DR InterPro; IPR017853; Glycoside_hydrolase_SF.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR014756; Ig_E-set.
DR InterPro; IPR048650; ISOA1-3-like_C.
DR PANTHER; PTHR43002; GLYCOGEN DEBRANCHING ENZYME; 1.
DR PANTHER; PTHR43002:SF6; ISOAMYLASE 2, CHLOROPLASTIC; 1.
DR Pfam; PF00128; Alpha-amylase; 1.
DR Pfam; PF02922; CBM_48; 1.
DR Pfam; PF21156; ISOA1-3_C; 1.
DR SMART; SM00642; Aamy; 1.
DR SUPFAM; SSF51445; (Trans)glycosidases; 1.
DR SUPFAM; SSF81296; E set domains; 1.
DR SUPFAM; SSF51011; Glycosyl hydrolase domain; 1.
PE 4: Predicted;
KW Chloroplast {ECO:0000256|ARBA:ARBA00022528};
KW Plastid {ECO:0000256|ARBA:ARBA00022640};
KW Reference proteome {ECO:0000313|Proteomes:UP000011115};
KW Transit peptide {ECO:0000256|ARBA:ARBA00022946}.
FT DOMAIN 359..732
FT /note="Glycosyl hydrolase family 13 catalytic"
FT /evidence="ECO:0000259|SMART:SM00642"
SQ SEQUENCE 878 AA; 97998 MW; 46FD88555ACC6C8D CRC64;
MATSPIQLAV HSRLLSYGST ESTKLVPSSS GNRGKIVCSL RKLELEDMNF SGIGRNNDQE
APRRAHRRKA LSASRISLVP SAKRVPTYLF RTDIGGQVKV LVERTNGKYK VLVEVLPLEL
SYAHSELVMV WGLFRSDASC FMPLDLNRRG ADGKSSTVET PFVQGPSGKV TVELDFEASL
APFYISFYMK SQLVSDMENS EIRSHRNTNF VVPVGLSSGH PAPLGISFQP DGSVNFALFS
RSARSVVLCL YDDISVEKPS LEIDLDPYIN RSGDIWHAAL DCSLPFKTYG YRCKATTSGK
GELVLLDPYA KVIRRVIPRQ GGSEIRPKYL GELCLEPGYD WSGDVPPSLP MEKLIIYRLN
VTQFTKDKSS KLPDDLAGTF SGISEKWHHF KDLGVNAMLL EPIFPFDEQK GPYFPWHFFS
PGNMYGPSGD PLSAIKSMKD MVKKLHANGI EVFLEVVFTH TAEDAPLMNV DNFSYCIKGG
QYLNIQNALN CNYPIVQQMI LDCLRHWVIE FHIDGFVFVN ASSLLRGFNG EILSRPPLVE
AIAFDPILSK VKMIADNWNP LTNDSKENLF PHWRRWAEIN MRFCDDIRDF LRGEGLLSNL
ATRLCGSGDI FAGGRGPAFS FNYIARNSGL TLVDLVSFSS NEVASELSWN CGQEGATTNN
IVLERRLKQV RNFLFILFIS LGVPVLNMGD ECGQSSGGSP AYDARKSLGW NTLKTGFGTQ
IAQFISFLSN LRMRRSDLLQ KRTFLKEENI QWHGSDQSPP KWDGPSSKFL AMTLKADAEV
SQTLVSDIVG DLFVAFNGAG DSEIVILPPP PTDMVWHRLV DTALPFPGFF DEKGTPVEDE
LVAYEMKSHS CLLFEAQRLA EIDSSKRKKQ IRLSSKRQ
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