ID M1A2S9_SOLTU Unreviewed; 402 AA.
AC M1A2S9;
DT 03-APR-2013, integrated into UniProtKB/TrEMBL.
DT 03-APR-2013, sequence version 1.
DT 27-MAR-2024, entry version 44.
DE RecName: Full=glycerophosphodiester phosphodiesterase {ECO:0000256|ARBA:ARBA00012247};
DE EC=3.1.4.46 {ECO:0000256|ARBA:ARBA00012247};
OS Solanum tuberosum (Potato).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum.
OX NCBI_TaxID=4113 {ECO:0000313|EnsemblPlants:PGSC0003DMT400013401, ECO:0000313|Proteomes:UP000011115};
RN [1] {ECO:0000313|Proteomes:UP000011115}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. DM1-3 516 R44 {ECO:0000313|Proteomes:UP000011115};
RX PubMed=21743474; DOI=10.1038/nature10158;
RG The Potato Genome Sequencing Consortium;
RT "Genome sequence and analysis of the tuber crop potato.";
RL Nature 475:189-195(2011).
RN [2] {ECO:0000313|EnsemblPlants:PGSC0003DMT400013401}
RP IDENTIFICATION.
RC STRAIN=DM1-3 516 R44 {ECO:0000313|EnsemblPlants:PGSC0003DMT400013401};
RG EnsemblPlants;
RL Submitted (JUN-2015) to UniProtKB.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a sn-glycero-3-phosphodiester + H2O = an alcohol + H(+) + sn-
CC glycerol 3-phosphate; Xref=Rhea:RHEA:12969, ChEBI:CHEBI:15377,
CC ChEBI:CHEBI:15378, ChEBI:CHEBI:30879, ChEBI:CHEBI:57597,
CC ChEBI:CHEBI:83408; EC=3.1.4.46;
CC Evidence={ECO:0000256|ARBA:ARBA00029315};
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DR AlphaFoldDB; M1A2S9; -.
DR STRING; 4113.M1A2S9; -.
DR PaxDb; 4113-PGSC0003DMT400013401; -.
DR EnsemblPlants; PGSC0003DMT400013401; PGSC0003DMT400013401; PGSC0003DMG400005228.
DR Gramene; PGSC0003DMT400013401; PGSC0003DMT400013401; PGSC0003DMG400005228.
DR eggNOG; KOG2421; Eukaryota.
DR InParanoid; M1A2S9; -.
DR OMA; HAENRSI; -.
DR Proteomes; UP000011115; Unassembled WGS sequence.
DR ExpressionAtlas; M1A2S9; differential.
DR GO; GO:0008889; F:glycerophosphodiester phosphodiesterase activity; IEA:UniProtKB-EC.
DR GO; GO:0006071; P:glycerol metabolic process; IEA:UniProtKB-KW.
DR GO; GO:0046475; P:glycerophospholipid catabolic process; IBA:GO_Central.
DR Gene3D; 3.20.20.190; Phosphatidylinositol (PI) phosphodiesterase; 1.
DR InterPro; IPR030395; GP_PDE_dom.
DR InterPro; IPR017946; PLC-like_Pdiesterase_TIM-brl.
DR PANTHER; PTHR22958:SF34; GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPD3; 1.
DR PANTHER; PTHR22958; GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE; 1.
DR Pfam; PF03009; GDPD; 1.
DR SUPFAM; SSF51695; PLC-like phosphodiesterases; 1.
DR PROSITE; PS51704; GP_PDE; 1.
PE 4: Predicted;
KW Glycerol metabolism {ECO:0000256|ARBA:ARBA00022798};
KW Reference proteome {ECO:0000313|Proteomes:UP000011115}.
FT DOMAIN 55..353
FT /note="GP-PDE"
FT /evidence="ECO:0000259|PROSITE:PS51704"
SQ SEQUENCE 402 AA; 46328 MW; 90FBFCA74A39AD47 CRC64;
MALKAIPISQ VVPQIDEIHV ENVTFPSLYN NNSTPLSHGE DEDDVGKMNN NNNKFVVMGH
RGSGTNMLQY SSCNEKTIKE NTLRSFNEAA KFNLQFIEFD VQVTRDGHPV IFHDIFIFTQ
QEGKLIEKRV TDLTLEEFLS YGPQNGSTNV TDSSPFIRDV EKPLFRKMKD GRIFEWKVEE
DDRLCTLQDV FENVSQSVGF NIEFKFDDKR NYKDEELVRV IRAVLQVVFK YAKGRRIMFS
SFQPDVAQLI RKEQTAYRVF FLTNGGSEIY PDIRRNSLDE AIKLCLEGGL QGIVSEVKAI
LRNPRMIAKI KESNLSLMTY GQLNNEKEVV YLQYMMGVDG VIVDFVEEIT SAVAQFSKQV
HHDGKEHLLL LEKRLLSEQR ITPCSEDEIS YFRRLVPELI HS
//
