ID M1A8Z1_SOLTU Unreviewed; 907 AA.
AC M1A8Z1;
DT 03-APR-2013, integrated into UniProtKB/TrEMBL.
DT 03-APR-2013, sequence version 1.
DT 24-JAN-2024, entry version 55.
DE SubName: Full=WD-repeat protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400017459};
GN Name=102578407 {ECO:0000313|EnsemblPlants:PGSC0003DMT400017459};
OS Solanum tuberosum (Potato).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum.
OX NCBI_TaxID=4113 {ECO:0000313|EnsemblPlants:PGSC0003DMT400017459, ECO:0000313|Proteomes:UP000011115};
RN [1] {ECO:0000313|Proteomes:UP000011115}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. DM1-3 516 R44 {ECO:0000313|Proteomes:UP000011115};
RX PubMed=21743474; DOI=10.1038/nature10158;
RG The Potato Genome Sequencing Consortium;
RT "Genome sequence and analysis of the tuber crop potato.";
RL Nature 475:189-195(2011).
RN [2] {ECO:0000313|EnsemblPlants:PGSC0003DMT400017459}
RP IDENTIFICATION.
RC STRAIN=DM1-3 516 R44 {ECO:0000313|EnsemblPlants:PGSC0003DMT400017459};
RG EnsemblPlants;
RL Submitted (JUN-2015) to UniProtKB.
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DR RefSeq; XP_006345412.1; XM_006345350.2.
DR AlphaFoldDB; M1A8Z1; -.
DR STRING; 4113.M1A8Z1; -.
DR PaxDb; 4113-PGSC0003DMT400017459; -.
DR EnsemblPlants; PGSC0003DMT400017459; PGSC0003DMT400017459; PGSC0003DMG400006784.
DR GeneID; 102578407; -.
DR Gramene; PGSC0003DMT400017459; PGSC0003DMT400017459; PGSC0003DMG400006784.
DR KEGG; sot:102578407; -.
DR eggNOG; KOG1539; Eukaryota.
DR HOGENOM; CLU_002774_2_0_1; -.
DR InParanoid; M1A8Z1; -.
DR OMA; WESVVTG; -.
DR OrthoDB; 5477616at2759; -.
DR Proteomes; UP000011115; Unassembled WGS sequence.
DR ExpressionAtlas; M1A8Z1; baseline and differential.
DR GO; GO:0034388; C:Pwp2p-containing subcomplex of 90S preribosome; IBA:GO_Central.
DR GO; GO:0032040; C:small-subunit processome; IBA:GO_Central.
DR GO; GO:0006364; P:rRNA processing; IBA:GO_Central.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 2.
DR InterPro; IPR024977; Apc4-like_WD40_dom.
DR InterPro; IPR007319; SSU_processome_Utp21.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR PANTHER; PTHR22840; WD REPEAT-CONTAINING PROTEIN 36; 1.
DR PANTHER; PTHR22840:SF12; WD REPEAT-CONTAINING PROTEIN 36; 1.
DR Pfam; PF12894; ANAPC4_WD40; 1.
DR Pfam; PF04192; Utp21; 1.
DR Pfam; PF00400; WD40; 3.
DR SMART; SM00320; WD40; 9.
DR SUPFAM; SSF50978; WD40 repeat-like; 2.
DR PROSITE; PS00678; WD_REPEATS_1; 1.
DR PROSITE; PS50082; WD_REPEATS_2; 4.
DR PROSITE; PS50294; WD_REPEATS_REGION; 2.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000011115};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW ProRule:PRU00221}.
FT DOMAIN 190..276
FT /note="Anaphase-promoting complex subunit 4-like WD40"
FT /evidence="ECO:0000259|Pfam:PF12894"
FT REPEAT 220..262
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 264..295
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 470..504
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 553..586
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT DOMAIN 687..903
FT /note="Small-subunit processome Utp21"
FT /evidence="ECO:0000259|Pfam:PF04192"
FT REGION 744..764
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 907 AA; 101427 MW; 2AE8EE00C454ADC9 CRC64;
MGIFEPFRAI GYITTNVPFS VQRLGTETFV TVSVGKAFQV YNCAKLSLVL VGPQLPKKIR
ALASYREYTF AAYGSDIAVV KRAHQVATWS GHSAKVNQLL IFGEHVLSVD VEGNIFIWQF
KGIDKNPAPI GHIKLEDEFS PSCIMHPDTY LNKVVLGSQE GALQLWNIST KKKIHEFKGW
GSSITCCVSS PALDVIAVGC ADGKIHVHNI RYDEEVASFS HSTRGAVNAL SFSTDGQPLL
ASGGSSGVIS IWNLEKRRLH SVIKEAHDSS IVSLQFFANE PVLMSSSADN SMKMWIFDTS
DGEPRLLRFR SGHSAPPLCI KFYANGRHIL SAGQDRAFRL FSVVQDQQSR ELSQRHVSKR
AKKLKLKKEE IKLKPVIAFD VAEIRERDWC NVVTCHMDTP RAYVWRLQNF VLGEHILTPC
PENPTPVKAC AISACGNFAV LGTAGGWIER FNLQSGISRG NYVDALEGES AAHNGEVIGI
ACDATNTIMI SAGYHGDVKV WDFKCRQLKY KWKVGCSLVK IVFHRSNGLL ATVADDLVIR
LFDVIAQRLV RKFEGHSDRI TDMCFSEDGK WLLTSSMDGT LRIWDVILAR QIDAIQVDLS
ITALSLSPNM DILATSHVDQ NGVYLWVNQA MFSGAASFAS YGSGKEIVNV KMPSAASEKD
GDKSDNRTIF EPLESSDTSQ FLNSSHQIPD LVTLSLLPKS QWQSLINLDI IKARNKPIEP
PKKPEKAPFF LPSIPSLSGE ILFKPSEGTN EESNAQNTRL EESSKKTDLP VSKFLQILKS
CAEKENFAPF TNHIKSLSPS ILDMELRMLQ IIDDDDEQEP EKRQELHFIE LLLDYFIHEI
SCRSNFEYIQ ALIRLFLKIH GETVRRQSKL QEKARKLLEV QSAVWQKIDK LFQNTRCVIT
FLSNSQL
//
