ID M1B546_SOLTU Unreviewed; 958 AA.
AC M1B546;
DT 03-APR-2013, integrated into UniProtKB/TrEMBL.
DT 03-APR-2013, sequence version 1.
DT 24-JAN-2024, entry version 43.
DE SubName: Full=RNA binding protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400037286};
OS Solanum tuberosum (Potato).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum.
OX NCBI_TaxID=4113 {ECO:0000313|EnsemblPlants:PGSC0003DMT400037286, ECO:0000313|Proteomes:UP000011115};
RN [1] {ECO:0000313|Proteomes:UP000011115}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. DM1-3 516 R44 {ECO:0000313|Proteomes:UP000011115};
RX PubMed=21743474; DOI=10.1038/nature10158;
RG The Potato Genome Sequencing Consortium;
RT "Genome sequence and analysis of the tuber crop potato.";
RL Nature 475:189-195(2011).
RN [2] {ECO:0000313|EnsemblPlants:PGSC0003DMT400037286}
RP IDENTIFICATION.
RC STRAIN=DM1-3 516 R44 {ECO:0000313|EnsemblPlants:PGSC0003DMT400037286};
RG EnsemblPlants;
RL Submitted (JUN-2015) to UniProtKB.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR AlphaFoldDB; M1B546; -.
DR STRING; 4113.M1B546; -.
DR PaxDb; 4113-PGSC0003DMT400037286; -.
DR EnsemblPlants; PGSC0003DMT400037286; PGSC0003DMT400037286; PGSC0003DMG400014387.
DR Gramene; PGSC0003DMT400037286; PGSC0003DMT400037286; PGSC0003DMG400014387.
DR eggNOG; KOG1847; Eukaryota.
DR HOGENOM; CLU_016589_0_0_1; -.
DR InParanoid; M1B546; -.
DR OMA; IDMATYY; -.
DR Proteomes; UP000011115; Unassembled WGS sequence.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0000395; P:mRNA 5'-splice site recognition; IBA:GO_Central.
DR Gene3D; 1.10.10.790; Surp module; 2.
DR InterPro; IPR000061; Surp.
DR InterPro; IPR040397; SWAP.
DR InterPro; IPR035967; SWAP/Surp_sf.
DR InterPro; IPR019147; SWAP_N_domain.
DR PANTHER; PTHR13161; SPLICING FACTOR SUPPRESSOR OF WHITE APRICOT; 1.
DR PANTHER; PTHR13161:SF15; SPLICING FACTOR, SUPPRESSOR OF WHITE-APRICOT HOMOLOG; 1.
DR Pfam; PF09750; DRY_EERY; 1.
DR Pfam; PF01805; Surp; 2.
DR SMART; SM01141; DRY_EERY; 1.
DR SMART; SM00648; SWAP; 2.
DR SUPFAM; SSF109905; Surp module (SWAP domain); 2.
DR PROSITE; PS50128; SURP; 2.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000011115};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 151..193
FT /note="SURP motif"
FT /evidence="ECO:0000259|PROSITE:PS50128"
FT DOMAIN 370..412
FT /note="SURP motif"
FT /evidence="ECO:0000259|PROSITE:PS50128"
FT REGION 211..355
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 465..539
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 590..945
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 254..276
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 278..312
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 314..344
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 490..522
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 607..623
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 644..659
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 660..685
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 697..723
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 738..755
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 763..777
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 792..806
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 807..822
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 823..842
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 854..903
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 904..940
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 958 AA; 107081 MW; 62DA7F4C94197106 CRC64;
MDLEVVGRHA LFFDDDSLAA FVNSGDALVD WNSLQIDRYD VRHLLSAPPP SRRRSHSSSS
YNLVDASIQL ELDHERYLDL PLPSDEPDLE EGDESADAVA YRAVGFSYGN TDDFADRKSS
EVQESSGFRP SFQVPENLLQ CLPPTEKLHQ IIARTALFVS KHGGQSEIVL RVKQGNNPTF
GFLMPDHGLH PYFRFLVDHP ELLQSDSDLN AQSEGTKTSN EHKEHDGGGG ALSMLGSVYG
FGEDEEPANG DDPGSRVSSV QVESLDTSNI SRPLERAESS SKAFENGENE TDEKGSTHSL
RSSKDKEKVP SLKKNNLVSA SKSGSRSSMR KESDFSSSAA AEKSKTDISG LGAVSKTGPM
VEPPFELKRL IDKIVEFILR NGKQFESTLM EQDSKHGRFP FLLPSNQYHP YYIKVLQKAQ
ESKVHGSEKR SSLKENDSTS LRSAEYDLPY VFDKKEKFKM VIGKSKKETQ DSLTRTSEQE
AGAATRGIKN PNLSIISGSS KNGDSQGQSS EGAQTSIFLN VPPSGPSIVG QKSDRRMGHS
VSIPKVKEIA KSAAAEAASE ADSSEAHLSK EQKLKAERLR RAKMFVSLLK GGGAAPAKRD
SLGGSVEPQG SALSGSVTEV NVATKEREGS AALAELTAVE REGSTAPLDN NNVSNENEKS
EMQHTAEEHE RRSRRKYRSR SGGIHEDEDE EEEGQEEEQQ RSRKKRRSSR KDEDEESEKM
RDDKRSRKKR RSRRHRHKDG ENAGEDEDDE DNRRSRKKHH KRHSSPENDD EQRDAERHHK
HGRKKHSSHR SSRENRKDDD EGGYKHSKKK HRSHRTSHRS RDGHEHKTKD SSDDESDRSH
RTSHRSKDRH KHRTKHSSDN EPERRHKHAS STDDEEQQYD MGGKNEKCTK EREELEEGEI
LTKVSDQSRG SLGGSVSREA SVDVSSSQQR APSQPSESTE ISDDLRAKIR AMLMATRT
//
