ID M1BBW9_SOLTU Unreviewed; 613 AA.
AC M1BBW9;
DT 03-APR-2013, integrated into UniProtKB/TrEMBL.
DT 03-APR-2013, sequence version 1.
DT 27-MAR-2024, entry version 52.
DE SubName: Full=Nucleic acid binding protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400041750};
GN Name=102598855 {ECO:0000313|EnsemblPlants:PGSC0003DMT400041750};
OS Solanum tuberosum (Potato).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum.
OX NCBI_TaxID=4113 {ECO:0000313|EnsemblPlants:PGSC0003DMT400041750, ECO:0000313|Proteomes:UP000011115};
RN [1] {ECO:0000313|Proteomes:UP000011115}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. DM1-3 516 R44 {ECO:0000313|Proteomes:UP000011115};
RX PubMed=21743474; DOI=10.1038/nature10158;
RG The Potato Genome Sequencing Consortium;
RT "Genome sequence and analysis of the tuber crop potato.";
RL Nature 475:189-195(2011).
RN [2] {ECO:0000313|EnsemblPlants:PGSC0003DMT400041750}
RP IDENTIFICATION.
RC STRAIN=DM1-3 516 R44 {ECO:0000313|EnsemblPlants:PGSC0003DMT400041750};
RG EnsemblPlants;
RL Submitted (JUN-2015) to UniProtKB.
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DR RefSeq; XP_006353154.1; XM_006353092.2.
DR AlphaFoldDB; M1BBW9; -.
DR STRING; 4113.M1BBW9; -.
DR PaxDb; 4113-PGSC0003DMT400041750; -.
DR EnsemblPlants; PGSC0003DMT400041750; PGSC0003DMT400041750; PGSC0003DMG400016189.
DR GeneID; 102598855; -.
DR Gramene; PGSC0003DMT400041750; PGSC0003DMT400041750; PGSC0003DMG400016189.
DR KEGG; sot:102598855; -.
DR eggNOG; KOG2190; Eukaryota.
DR HOGENOM; CLU_018025_3_0_1; -.
DR InParanoid; M1BBW9; -.
DR OMA; SRYSHAQ; -.
DR OrthoDB; 774557at2759; -.
DR Proteomes; UP000011115; Unassembled WGS sequence.
DR ExpressionAtlas; M1BBW9; baseline and differential.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR GO; GO:0010468; P:regulation of gene expression; IBA:GO_Central.
DR CDD; cd22460; KH-I_PEPPER_rpt2_like; 1.
DR Gene3D; 3.30.310.210; -; 1.
DR Gene3D; 3.30.1370.10; K Homology domain, type 1; 3.
DR InterPro; IPR004087; KH_dom.
DR InterPro; IPR004088; KH_dom_type_1.
DR InterPro; IPR036612; KH_dom_type_1_sf.
DR PANTHER; PTHR10288:SF247; K HOMOLOGY DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR10288; KH DOMAIN CONTAINING RNA BINDING PROTEIN; 1.
DR Pfam; PF00013; KH_1; 4.
DR SMART; SM00322; KH; 5.
DR SUPFAM; SSF54791; Eukaryotic type KH-domain (KH-domain type I); 5.
DR PROSITE; PS50084; KH_TYPE_1; 4.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000011115};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00117}.
FT DOMAIN 31..127
FT /note="K Homology"
FT /evidence="ECO:0000259|SMART:SM00322"
FT DOMAIN 130..205
FT /note="K Homology"
FT /evidence="ECO:0000259|SMART:SM00322"
FT DOMAIN 272..348
FT /note="K Homology"
FT /evidence="ECO:0000259|SMART:SM00322"
FT DOMAIN 360..435
FT /note="K Homology"
FT /evidence="ECO:0000259|SMART:SM00322"
FT DOMAIN 542..612
FT /note="K Homology"
FT /evidence="ECO:0000259|SMART:SM00322"
FT REGION 1..25
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 448..469
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 513..540
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 613 AA; 65961 MW; 62755B576033B021 CRC64;
MNNQNHFRPP IKRFGSGSGS GGDPTAVLQP GQVHFRLLCH VSTAGGVIGN SGGLIRQLEA
QTGCRIRFEE PLPNCHERVV NIIGDSIIDR KIRISYDGSS EEVEVVEVSR AQEGLIRVYE
RVLQLEGNGG AVGCRLLAIS GQIGALMGKG GVIVDGIRKS TGAKIKVLTK EQLPACAIPG
EELIQIMGVI AVVKRALVHV SRRLQVRLPA ERYKDQVTSK GASHEQPADY PLDTKSSIQP
LPRNAVNHSS VAHSLSSDVD RVLNLDADSA QRKVVFRLLC SYISAGGVIG KGAHIVKALE
KDTGASIKFS TPTVRSKERV AIISSLEIRK PLYSPAQVAT DRVFERSVEV SREHGHIKAG
SISARILVGP HEVKCLLDEK GIVSLDIGSA MGVEVQLLDA ENAPNCAAEN DKIVQIIGEH
DNVRNALIQL TGRLREMVFS SLVSEGAVPT NYSCSSRSES SKHEFGTSMP SLPNHLSSFS
SLYQTDHLGF GPNLGGPHTL LQDKFKDRLN SKMGKPVKQS MGGWKSSHGG RESGRMDENE
TASKPVVINV PKQKFGSVYG EDGSNLTRLK EISGATVILQ DPGPGECDGK VIISGTPEQI
QMAQSLLQAF IFL
//