ID M1C728_SOLTU Unreviewed; 225 AA.
AC M1C728;
DT 03-APR-2013, integrated into UniProtKB/TrEMBL.
DT 03-APR-2013, sequence version 1.
DT 27-MAR-2024, entry version 49.
DE SubName: Full=Partner of Y14-mago {ECO:0000313|EnsemblPlants:PGSC0003DMT400061112};
GN Name=102592344 {ECO:0000313|EnsemblPlants:PGSC0003DMT400061112};
OS Solanum tuberosum (Potato).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum.
OX NCBI_TaxID=4113 {ECO:0000313|EnsemblPlants:PGSC0003DMT400061112, ECO:0000313|Proteomes:UP000011115};
RN [1] {ECO:0000313|Proteomes:UP000011115}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. DM1-3 516 R44 {ECO:0000313|Proteomes:UP000011115};
RX PubMed=21743474; DOI=10.1038/nature10158;
RG The Potato Genome Sequencing Consortium;
RT "Genome sequence and analysis of the tuber crop potato.";
RL Nature 475:189-195(2011).
RN [2] {ECO:0000313|EnsemblPlants:PGSC0003DMT400061112}
RP IDENTIFICATION.
RC STRAIN=DM1-3 516 R44 {ECO:0000313|EnsemblPlants:PGSC0003DMT400061112};
RG EnsemblPlants;
RL Submitted (JUN-2015) to UniProtKB.
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DR RefSeq; XP_006349409.1; XM_006349347.2.
DR AlphaFoldDB; M1C728; -.
DR STRING; 4113.M1C728; -.
DR PaxDb; 4113-PGSC0003DMT400061112; -.
DR EnsemblPlants; PGSC0003DMT400061112; PGSC0003DMT400061112; PGSC0003DMG400023776.
DR GeneID; 102592344; -.
DR Gramene; PGSC0003DMT400061112; PGSC0003DMT400061112; PGSC0003DMG400023776.
DR KEGG; sot:102592344; -.
DR eggNOG; KOG4325; Eukaryota.
DR HOGENOM; CLU_074603_2_0_1; -.
DR InParanoid; M1C728; -.
DR OMA; AIWKKEM; -.
DR OrthoDB; 1216579at2759; -.
DR Proteomes; UP000011115; Unassembled WGS sequence.
DR ExpressionAtlas; M1C728; baseline and differential.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0035145; C:exon-exon junction complex; IBA:GO_Central.
DR GO; GO:0005730; C:nucleolus; IEA:EnsemblPlants.
DR GO; GO:0005654; C:nucleoplasm; IEA:EnsemblPlants.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:1903259; P:exon-exon junction complex disassembly; IBA:GO_Central.
DR GO; GO:0010628; P:positive regulation of gene expression; IEA:EnsemblPlants.
DR InterPro; IPR039333; PYM1.
DR InterPro; IPR015362; WIBG_mago-bd.
DR InterPro; IPR036348; WIBG_N_sf.
DR PANTHER; PTHR22959:SF0; PARTNER OF Y14 AND MAGO; 1.
DR PANTHER; PTHR22959; PYM PROTEIN; 1.
DR Pfam; PF09282; Mago-bind; 1.
DR SMART; SM01273; Mago-bind; 1.
DR SUPFAM; SSF101931; Pym (Within the bgcn gene intron protein, WIBG), N-terminal domain; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000011115}.
FT DOMAIN 26..52
FT /note="WIBG Mago-binding"
FT /evidence="ECO:0000259|SMART:SM01273"
FT REGION 23..42
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 72..132
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 145..165
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 165..225
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 99..117
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 118..132
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 145..163
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 225 AA; 25154 MW; 8ACFC8464774AA6A CRC64;
MASSTTRGED EAKQLAAELG KTLKEGERLL APTRRPDGTL RKPIRIRAGY VPQDEVAIYK
SKGAIWKKEM ESLQDVPPGY DPVMDEKPKS KAAKRNERKK EKRQQAALEK GKNPENDEVS
SAENSVDGPD QVESVMSQIN NLAISANPVV PPSNSTESSG MGDSVQDIDK KIRALKKKIR
LTEAQQQKTD EKDMKPEQLE KMAKLESWRK ELKLLEDKKA ELEAS
//
