ID   M1DFI8_SOLTU            Unreviewed;       398 AA.
AC   M1DFI8;
DT   03-APR-2013, integrated into UniProtKB/TrEMBL.
DT   03-APR-2013, sequence version 1.
DT   27-MAR-2024, entry version 37.
DE   SubName: Full=RNase H family protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400088240};
OS   Solanum tuberosum (Potato).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum.
OX   NCBI_TaxID=4113 {ECO:0000313|EnsemblPlants:PGSC0003DMT400088240, ECO:0000313|Proteomes:UP000011115};
RN   [1] {ECO:0000313|Proteomes:UP000011115}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. DM1-3 516 R44 {ECO:0000313|Proteomes:UP000011115};
RX   PubMed=21743474; DOI=10.1038/nature10158;
RG   The Potato Genome Sequencing Consortium;
RT   "Genome sequence and analysis of the tuber crop potato.";
RL   Nature 475:189-195(2011).
RN   [2] {ECO:0000313|EnsemblPlants:PGSC0003DMT400088240}
RP   IDENTIFICATION.
RC   STRAIN=DM1-3 516 R44 {ECO:0000313|EnsemblPlants:PGSC0003DMT400088240};
RG   EnsemblPlants;
RL   Submitted (JUN-2015) to UniProtKB.
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DR   AlphaFoldDB; M1DFI8; -.
DR   STRING; 4113.M1DFI8; -.
DR   PaxDb; 4113-PGSC0003DMT400088240; -.
DR   EnsemblPlants; PGSC0003DMT400088240; PGSC0003DMT400088240; PGSC0003DMG400037811.
DR   Gramene; PGSC0003DMT400088240; PGSC0003DMT400088240; PGSC0003DMG400037811.
DR   eggNOG; KOG1075; Eukaryota.
DR   HOGENOM; CLU_000680_5_2_1; -.
DR   InParanoid; M1DFI8; -.
DR   OMA; IREIWIA; -.
DR   Proteomes; UP000011115; Unassembled WGS sequence.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0004523; F:RNA-DNA hybrid ribonuclease activity; IEA:InterPro.
DR   CDD; cd06222; RNase_H_like; 1.
DR   Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR   InterPro; IPR044730; RNase_H-like_dom_plant.
DR   InterPro; IPR012337; RNaseH-like_sf.
DR   InterPro; IPR002156; RNaseH_domain.
DR   InterPro; IPR036397; RNaseH_sf.
DR   InterPro; IPR026960; RVT-Znf.
DR   PANTHER; PTHR47723; OS05G0353850 PROTEIN; 1.
DR   PANTHER; PTHR47723:SF14; RNASE H TYPE-1 DOMAIN-CONTAINING PROTEIN; 1.
DR   Pfam; PF13456; RVT_3; 1.
DR   Pfam; PF13966; zf-RVT; 1.
DR   SUPFAM; SSF53098; Ribonuclease H-like; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000011115}.
FT   DOMAIN          23..108
FT                   /note="Reverse transcriptase zinc-binding"
FT                   /evidence="ECO:0000259|Pfam:PF13966"
FT   DOMAIN          232..348
FT                   /note="RNase H type-1"
FT                   /evidence="ECO:0000259|Pfam:PF13456"
SQ   SEQUENCE   398 AA;  46252 MW;  FEA5C64E418BAE35 CRC64;
     MNVDLNLNID DRPIWTPTQN GSFTMASAWE IQRQRNAKSW FDSSTWCKKV PLKMSFILWR
     VVRDRIPTDS RLTKMGIAMS SRCCCCKSPQ KEDVDHFSCS GEFEKKIWSI LCGPLGIPFD
     NIPIRMLIKF WWTWKTKNPV LNMLMKCLPA ITLWEVWKAR CGDKYSKDYY NTKKTINNIS
     TSLVLILKGQ FEKIKVDPDW ESVRYLLISN ISNKRIVQVK WLNPSNSFVK INSDGSCKDG
     YCGGGGVIRD HRGHLIFAYS LNLGHGTNNW AEAKALLYGV EWCVRNEYDY TLAESDSKVL
     VDCVNDINSI PWRIYDEVRE LKAHMETTGF ILSHCYREAN KVADHLASLS YDNPNDMAYD
     VFAELPTRVK GLMNMDRWEM TNFRTMKKKR NDLIWEPP
//