ID M1VGJ7_CYAM1 Unreviewed; 1487 AA.
AC M1VGJ7;
DT 01-MAY-2013, integrated into UniProtKB/TrEMBL.
DT 01-MAY-2013, sequence version 1.
DT 27-MAR-2024, entry version 53.
DE SubName: Full=Vesicle coat complex COPII, subunit Sec24 {ECO:0000313|EMBL:BAM82292.1};
GN ORFNames=CYME_CMQ471C {ECO:0000313|EMBL:BAM82292.1};
OS Cyanidioschyzon merolae (strain NIES-3377 / 10D) (Unicellular red alga).
OC Eukaryota; Rhodophyta; Bangiophyceae; Cyanidiales; Cyanidiaceae;
OC Cyanidioschyzon.
OX NCBI_TaxID=280699 {ECO:0000313|EMBL:BAM82292.1, ECO:0000313|Proteomes:UP000007014};
RN [1] {ECO:0000313|EMBL:BAM82292.1, ECO:0000313|Proteomes:UP000007014}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=10D {ECO:0000313|EMBL:BAM82292.1,
RC ECO:0000313|Proteomes:UP000007014};
RX PubMed=15071595; DOI=10.1038/nature02398;
RA Matsuzaki M., Misumi O., Shin-i T., Maruyama S., Takahara M.,
RA Miyagishima S., Mori T., Nishida K., Yagisawa F., Nishida K., Yoshida Y.,
RA Nishimura Y., Nakao S., Kobayashi T., Momoyama Y., Higashiyama T.,
RA Minoda A., Sano M., Nomoto H., Oishi K., Hayashi H., Ohta F., Nishizaka S.,
RA Haga S., Miura S., Morishita T., Kabeya Y., Terasawa K., Suzuki Y.,
RA Ishii Y., Asakawa S., Takano H., Ohta N., Kuroiwa H., Tanaka K.,
RA Shimizu N., Sugano S., Sato N., Nozaki H., Ogasawara N., Kohara Y.,
RA Kuroiwa T.;
RT "Genome sequence of the ultrasmall unicellular red alga Cyanidioschyzon
RT merolae 10D.";
RL Nature 428:653-657(2004).
RN [2] {ECO:0000313|EMBL:BAM82292.1, ECO:0000313|Proteomes:UP000007014}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=10D {ECO:0000313|EMBL:BAM82292.1,
RC ECO:0000313|Proteomes:UP000007014};
RX PubMed=17623057; DOI=10.1186/1741-7007-5-28;
RA Nozaki H., Takano H., Misumi O., Terasawa K., Matsuzaki M., Maruyama S.,
RA Nishida K., Yagisawa F., Yoshida Y., Fujiwara T., Takio S., Tamura K.,
RA Chung S.J., Nakamura S., Kuroiwa H., Tanaka K., Sato N., Kuroiwa T.;
RT "A 100%-complete sequence reveals unusually simple genomic features in the
RT hot-spring red alga Cyanidioschyzon merolae.";
RL BMC Biol. 5:28-28(2007).
CC -!- SIMILARITY: Belongs to the SEC23/SEC24 family. SEC24 subfamily.
CC {ECO:0000256|ARBA:ARBA00008334}.
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DR EMBL; AP006499; BAM82292.1; -; Genomic_DNA.
DR RefSeq; XP_005538328.1; XM_005538271.1.
DR STRING; 280699.M1VGJ7; -.
DR EnsemblPlants; CMQ471CT; CMQ471CT; CMQ471C.
DR GeneID; 16996522; -.
DR Gramene; CMQ471CT; CMQ471CT; CMQ471C.
DR KEGG; cme:CYME_CMQ471C; -.
DR eggNOG; KOG1985; Eukaryota.
DR HOGENOM; CLU_249362_0_0_1; -.
DR OMA; INPFMTF; -.
DR OrthoDB; 977017at2759; -.
DR Proteomes; UP000007014; Chromosome 17.
DR GO; GO:0030127; C:COPII vesicle coat; IEA:InterPro.
DR GO; GO:0005794; C:Golgi apparatus; IEA:UniProtKB-KW.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0006888; P:endoplasmic reticulum to Golgi vesicle-mediated transport; IEA:InterPro.
DR GO; GO:0006886; P:intracellular protein transport; IEA:InterPro.
DR Gene3D; 2.60.40.1670; beta-sandwich domain of Sec23/24; 1.
DR Gene3D; 1.20.120.730; Sec23/Sec24 helical domain; 1.
DR Gene3D; 3.40.20.10; Severin; 1.
DR Gene3D; 3.40.50.410; von Willebrand factor, type A domain; 1.
DR Gene3D; 2.30.30.380; Zn-finger domain of Sec23/24; 1.
DR InterPro; IPR029006; ADF-H/Gelsolin-like_dom_sf.
DR InterPro; IPR036180; Gelsolin-like_dom_sf.
DR InterPro; IPR006900; Sec23/24_helical_dom.
DR InterPro; IPR036175; Sec23/24_helical_dom_sf.
DR InterPro; IPR006896; Sec23/24_trunk_dom.
DR InterPro; IPR012990; Sec23_24_beta_S.
DR InterPro; IPR036465; vWFA_dom_sf.
DR InterPro; IPR006895; Znf_Sec23_Sec24.
DR InterPro; IPR036174; Znf_Sec23_Sec24_sf.
DR PANTHER; PTHR13803; SEC24-RELATED PROTEIN; 1.
DR PANTHER; PTHR13803:SF39; SECRETORY 24AB, ISOFORM A; 1.
DR Pfam; PF08033; Sec23_BS; 1.
DR Pfam; PF04815; Sec23_helical; 1.
DR Pfam; PF04811; Sec23_trunk; 1.
DR Pfam; PF04810; zf-Sec23_Sec24; 1.
DR SUPFAM; SSF81995; beta-sandwich domain of Sec23/24; 1.
DR SUPFAM; SSF82754; C-terminal, gelsolin-like domain of Sec23/24; 1.
DR SUPFAM; SSF81811; Helical domain of Sec23/24; 1.
DR SUPFAM; SSF53300; vWA-like; 1.
DR SUPFAM; SSF82919; Zn-finger domain of Sec23/24; 1.
PE 3: Inferred from homology;
KW Golgi apparatus {ECO:0000256|ARBA:ARBA00023034};
KW Protein transport {ECO:0000256|ARBA:ARBA00022927};
KW Reference proteome {ECO:0000313|Proteomes:UP000007014};
KW Transport {ECO:0000256|ARBA:ARBA00022448}.
FT DOMAIN 789..827
FT /note="Zinc finger Sec23/Sec24-type"
FT /evidence="ECO:0000259|Pfam:PF04810"
FT DOMAIN 864..1115
FT /note="Sec23/Sec24 trunk"
FT /evidence="ECO:0000259|Pfam:PF04811"
FT DOMAIN 1120..1204
FT /note="Sec23/Sec24 beta-sandwich"
FT /evidence="ECO:0000259|Pfam:PF08033"
FT DOMAIN 1215..1293
FT /note="Sec23/Sec24 helical"
FT /evidence="ECO:0000259|Pfam:PF04815"
FT REGION 1..206
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 222..248
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 264..305
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 381..411
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 468..495
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 57..130
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 151..185
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 227..246
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 266..293
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1487 AA; 156883 MW; 1DCECD56A3696110 CRC64;
MNPASRPGSL PQGEQRGVAG DGTQRRVAVT AHEAAPLPRP GTGPSPADYA TASASRYGAA
YEQQRLSERS TFRQQQQASA ESHGTGNMGQ ISEAQLARNV SDQADQVTQR PGRSSAWSSE
ASSQGNGTAY TGAGAAMGAA PPPPGRQSVL PTPQQPQRSP AGLSSRSGAY EATAHSESAS
ALGQALPPQR ISPERTAPPV RGNMSNTMAS DALHASAADI YGSPRRFDTP SDNQGAMTTD
PRAAASALAS NSIPRAGVAQ GLQARPMPQG TDSLSSDGQH SAEGGNPTNS AHTGRAGGYV
PAPLGSSAYT GRGVTAATLE AGQHMEHQRP MLISDQGRSN LSHPSGAPGD ARYTPQAATS
QWATTGYGVA DSIAFGSNHG DSATATAVQH PSGIRTGPDT ARGMPSAQPV PGYRAAAPTV
PHLHPSMDAS MMNGASPVAT ATSAGHGTAA GNQYTEVSQR NTVPFSSQAP AVMPRAPPGG
PSGGITTTVS PPGQNRVPSF SNPLSMGTSL SAGANALGST TRSTISSGYS PVGYANRPVP
GVLMPSPGDG PPTAGQFAPA MASVGPAYAR QGNSAVSYQA VPGNVPYPMQ PIPGSGGAGP
QMAGPPVPGS YANLPTGMST APGAPYYGPP GGMVSAPVQA IPAPAAAAAT PSTDFASLPR
PALDPDSVMY RVWFGDALQR DLLWPQQVLA GDRSAHGGGY NPGAAGAGMP FEPQINFCAF
DPTWCCPIEL FRPCHPSRMR MSVNFFPNSA ATRSKTGLPL AAIVRPLAPP LSDDPLDQVP
VVNFGTNGIV RCRRCRTYIN FGVTFTDGGR RWRCNICQLL NDVPPEYYSP LDANGKRHDI
AERAELCSAS VEFVAPSEYM IRPPQPPVYV FVLDVSYGSI ISGAFITFVE TIRSSLDLLP
QDGRTRVAVL TFDTQLTYCV LPPGQQGEPR FLVTPDVDDV FLPTPEDVLA SLDESRPALL
RLLDKLQTIY DPATLQSTAT LTGNALTNGS ALGSAVMGAY YIMQHWGGKM VVLGASRPTM
GIAKLKDRDD AYALFTDREA RLLSPEEGQY KRLAVDFVRA QVSVDLFLTP PSGTYVDVAS
LGCLSKYTGG ELLYISGFEA TRDGARLARA LRRNLSRETG FEAVFRLRAS NGVRCSRFHG
RFFTRSSDLL AQPNVDSDKT YVVELSFDEA QLSSRYLCAQ SALLYTTSRG ERRIRVHTIV
APVTSIVNEL YRSADVNAVV NLLARSLFEH CTMKKADAVR RLIVDQIVDI LAKYRQLLSS
PGNVTSSQLV LPDALRCMPL YALGIIRSVL LSRDAATAMV LRLDCKAALL QAIDNGSIGT
LMAFAYPNCI RLEDGTGVHA SAAALSGMVL IDAGFEIFIW IAQDVPPPLL VSLLGPEITS
LFLAQPPPAH VPSPKALGEE VLRLPYHEPN DRGHEMRRRI HAVLEARWDA QPVVSLVRQG
TPAEARVLTL MTEDRTSSEM GYLEFLAAIQ RQLQQRVVGS NAAAGRS
//
