ID M1ZJ32_CAEEL Unreviewed; 97 AA.
AC M1ZJ32;
DT 01-MAY-2013, integrated into UniProtKB/TrEMBL.
DT 06-JUL-2016, sequence version 2.
DT 27-MAR-2024, entry version 68.
DE RecName: Full=snRNP core protein D1 {ECO:0000256|ARBA:ARBA00033121};
GN Name=snr-3 {ECO:0000313|EMBL:CCU83317.2,
GN ECO:0000313|WormBase:T28D9.10b};
GN ORFNames=CELE_T28D9.10 {ECO:0000313|EMBL:CCU83317.2}, T28D9.10
GN {ECO:0000313|WormBase:T28D9.10b};
OS Caenorhabditis elegans.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6239 {ECO:0000313|EMBL:CCU83317.2, ECO:0000313|Proteomes:UP000001940};
RN [1] {ECO:0000313|EMBL:CCU83317.2, ECO:0000313|Proteomes:UP000001940}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bristol N2 {ECO:0000313|EMBL:CCU83317.2,
RC ECO:0000313|Proteomes:UP000001940};
RX PubMed=9851916; DOI=10.1126/science.282.5396.2012;
RG The C. elegans sequencing consortium;
RA Sulson J.E., Waterston R.;
RT "Genome sequence of the nematode C. elegans: a platform for investigating
RT biology.";
RL Science 282:2012-2018(1998).
CC -!- SIMILARITY: Belongs to the snRNP core protein family.
CC {ECO:0000256|ARBA:ARBA00008146}.
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DR EMBL; BX284602; CCU83317.2; -; Genomic_DNA.
DR RefSeq; NP_001317766.1; NM_001330951.1.
DR AlphaFoldDB; M1ZJ32; -.
DR SMR; M1ZJ32; -.
DR PeptideAtlas; M1ZJ32; -.
DR EnsemblMetazoa; T28D9.10b.1; T28D9.10b.1; WBGene00004916.
DR GeneID; 174072; -.
DR AGR; WB:WBGene00004916; -.
DR WormBase; T28D9.10b; CE51626; WBGene00004916; snr-3.
DR HOGENOM; CLU_123956_4_0_1; -.
DR OrthoDB; 1092654at2759; -.
DR Proteomes; UP000001940; Chromosome II.
DR Bgee; WBGene00004916; Expressed in germ line (C elegans) and 4 other cell types or tissues.
DR ExpressionAtlas; M1ZJ32; baseline and differential.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProt.
DR GO; GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
DR Gene3D; 2.30.30.100; -; 1.
DR InterPro; IPR027141; LSm4/Sm_D1/D3.
DR InterPro; IPR010920; LSM_dom_sf.
DR InterPro; IPR047575; Sm.
DR InterPro; IPR001163; Sm_dom_euk/arc.
DR PANTHER; PTHR23338; SMALL NUCLEAR RIBONUCLEOPROTEIN SM; 1.
DR PANTHER; PTHR23338:SF18; SMALL NUCLEAR RIBONUCLEOPROTEIN SM D1; 1.
DR Pfam; PF01423; LSM; 1.
DR SUPFAM; SSF50182; Sm-like ribonucleoproteins; 1.
DR PROSITE; PS52002; SM; 1.
PE 1: Evidence at protein level;
KW mRNA processing {ECO:0000256|ARBA:ARBA00022664};
KW mRNA splicing {ECO:0000256|ARBA:ARBA00023187};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Proteomics identification {ECO:0007829|EPD:M1ZJ32,
KW ECO:0007829|PeptideAtlas:M1ZJ32};
KW Reference proteome {ECO:0000313|Proteomes:UP000001940};
KW Spliceosome {ECO:0000256|ARBA:ARBA00022728}.
FT DOMAIN 1..45
FT /note="Sm"
FT /evidence="ECO:0000259|PROSITE:PS52002"
FT REGION 57..97
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 97 AA; 10355 MW; CC64CB99238982C0 CRC64;
MGVDVAMNTH LRAVSMTVKN KEPVKLDTLS IRGNNIRYII LPDPLALDTL LIDDEPRKKA
RAARAGASRG RGRGGMRGGR GGRGRGRGGP RGGGPRR
//
