GenomeNet

Database: UniProt
Entry: M3XJT2_LATCH
LinkDB: M3XJT2_LATCH
Original site: M3XJT2_LATCH 
ID   M3XJT2_LATCH            Unreviewed;       540 AA.
AC   M3XJT2;
DT   01-MAY-2013, integrated into UniProtKB/TrEMBL.
DT   01-MAY-2013, sequence version 1.
DT   27-MAR-2024, entry version 59.
DE   RecName: Full=Tripartite motif containing 45 {ECO:0008006|Google:ProtNLM};
GN   Name=TRIM45 {ECO:0000313|Ensembl:ENSLACP00000022988.1};
OS   Latimeria chalumnae (Coelacanth).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Coelacanthiformes; Coelacanthidae; Latimeria.
OX   NCBI_TaxID=7897 {ECO:0000313|Ensembl:ENSLACP00000022988.1, ECO:0000313|Proteomes:UP000008672};
RN   [1] {ECO:0000313|Proteomes:UP000008672}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Wild caught {ECO:0000313|Proteomes:UP000008672};
RA   Di Palma F., Alfoldi J., Johnson J., Berlin A., Gnerre S., Jaffe D.,
RA   MacCallum I., Young S., Walker B.J., Lander E., Lindblad-Toh K.;
RT   "The draft genome of Latimeria chalumnae.";
RL   Submitted (AUG-2011) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|Ensembl:ENSLACP00000022988.1}
RP   IDENTIFICATION.
RG   Ensembl;
RL   Submitted (NOV-2023) to UniProtKB.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
CC   -!- SIMILARITY: Belongs to the TRIM/RBCC family.
CC       {ECO:0000256|ARBA:ARBA00008518}.
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DR   EMBL; AFYH01049552; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; AFYH01049553; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; AFYH01049554; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; AFYH01049555; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; AFYH01049556; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; AFYH01049557; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; AFYH01049558; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; AFYH01049559; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; AFYH01049560; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   RefSeq; XP_014342498.1; XM_014487012.1.
DR   AlphaFoldDB; M3XJT2; -.
DR   Ensembl; ENSLACT00000026002.1; ENSLACP00000022988.1; ENSLACG00000014852.2.
DR   GeneID; 102364871; -.
DR   CTD; 80263; -.
DR   GeneTree; ENSGT00940000154334; -.
DR   OrthoDB; 2916643at2759; -.
DR   Proteomes; UP000008672; Unassembled WGS sequence.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR   CDD; cd19809; Bbox1_TRIM45_C-X; 1.
DR   CDD; cd19785; Bbox2_TRIM45_C-X; 1.
DR   CDD; cd16588; RING-HC_TRIM45_C-VII; 1.
DR   Gene3D; 4.10.830.40; -; 1.
DR   Gene3D; 3.30.160.60; Classic Zinc Finger; 1.
DR   Gene3D; 2.60.40.10; Immunoglobulins; 1.
DR   Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR   InterPro; IPR003649; Bbox_C.
DR   InterPro; IPR017868; Filamin/ABP280_repeat-like.
DR   InterPro; IPR001298; Filamin/ABP280_rpt.
DR   InterPro; IPR013783; Ig-like_fold.
DR   InterPro; IPR014756; Ig_E-set.
DR   InterPro; IPR047153; TRIM45/56/19.
DR   InterPro; IPR000315; Znf_B-box.
DR   InterPro; IPR018957; Znf_C3HC4_RING-type.
DR   InterPro; IPR001841; Znf_RING.
DR   InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR   InterPro; IPR017907; Znf_RING_CS.
DR   PANTHER; PTHR25462; BONUS, ISOFORM C-RELATED; 1.
DR   PANTHER; PTHR25462:SF291; TRIPARTITE MOTIF-CONTAINING PROTEIN 45; 1.
DR   Pfam; PF00630; Filamin; 1.
DR   Pfam; PF00643; zf-B_box; 1.
DR   Pfam; PF00097; zf-C3HC4; 1.
DR   SMART; SM00502; BBC; 1.
DR   SMART; SM00336; BBOX; 2.
DR   SMART; SM00557; IG_FLMN; 1.
DR   SMART; SM00184; RING; 1.
DR   SUPFAM; SSF57845; B-box zinc-binding domain; 1.
DR   SUPFAM; SSF81296; E set domains; 1.
DR   SUPFAM; SSF57850; RING/U-box; 1.
DR   PROSITE; PS50194; FILAMIN_REPEAT; 1.
DR   PROSITE; PS50119; ZF_BBOX; 2.
DR   PROSITE; PS00518; ZF_RING_1; 1.
DR   PROSITE; PS50089; ZF_RING_2; 1.
PE   3: Inferred from homology;
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008672};
KW   Zinc {ECO:0000256|ARBA:ARBA00022833};
KW   Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW   ProRule:PRU00024}.
FT   DOMAIN          35..99
FT                   /note="RING-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50089"
FT   DOMAIN          131..177
FT                   /note="B box-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50119"
FT   DOMAIN          187..223
FT                   /note="B box-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50119"
FT   REPEAT          395..499
FT                   /note="Filamin"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00087"
FT   COILED          250..309
FT                   /evidence="ECO:0000256|SAM:Coils"
SQ   SEQUENCE   540 AA;  60070 MW;  59973FCAD17BF725 CRC64;
     MSESVEKLNV VSTPNAGLIS SSVRGEMGSP SRTHCPACGC LYLEPRILPC LHTLCSSCIR
     QLEPVSVPGL RVGDSDSGSE GSWAREQPCP VSLLCPVCDS EVDLPRDGVD GLVVNQLVVS
     EVFLLSLRSQ EVDLVCDLCS EGDAERRCEV CNVNLCDFCC KAHRRQKKTA SHGTIALKDL
     KGSGRILRPV LCSLHPPEEL KLFCETCDRP VCRDCVVGDH RDHACDFSSA VIHKYGDYVR
     ELLKRTQPHL GALEEALREI ERVSQAVEER VETVADEIKA FACSYVKAIE KHRDRLLKQL
     REMKNHKENC LHLQRIQLEQ LLSDMRTGVD FTEHLLTSGS NLEILVTKEV VINRLKRLNE
     MRYKIHPGVD DGIWFTPQER AGQCDGFEVQ GVILMRAVDP SKSIIQGEVG FHVGRQGRES
     EFLLVCNDTL GERMGRGGES VRVSIIHKDN NECIITPVVT DNNNGTYQIS FIPQEAGIYT
     VWVCVQGQHV QGSPFSLTVK SKFRKHNGMF HCCTFCSSQG QKDARCGCGG TMPGPFFAWD
//
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