GenomeNet

Database: UniProt
Entry: M3Y1S3_MUSPF
LinkDB: M3Y1S3_MUSPF
Original site: M3Y1S3_MUSPF 
ID   M3Y1S3_MUSPF            Unreviewed;       623 AA.
AC   M3Y1S3;
DT   01-MAY-2013, integrated into UniProtKB/TrEMBL.
DT   01-MAY-2013, sequence version 1.
DT   24-JAN-2024, entry version 63.
DE   SubName: Full=Autophagy related 16 like 1 {ECO:0000313|Ensembl:ENSMPUP00000005274.1};
DE   SubName: Full=Autophagy-related protein 16-1 isoform X1 {ECO:0000313|RefSeq:XP_004773561.1};
GN   Name=ATG16L1 {ECO:0000313|Ensembl:ENSMPUP00000005274.1,
GN   ECO:0000313|RefSeq:XP_004773561.1};
OS   Mustela putorius furo (European domestic ferret) (Mustela furo).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae;
OC   Mustelinae; Mustela.
OX   NCBI_TaxID=9669 {ECO:0000313|Ensembl:ENSMPUP00000005274.1};
RN   [1] {ECO:0000313|Ensembl:ENSMPUP00000005274.1}
RP   IDENTIFICATION.
RG   Ensembl;
RL   Submitted (MAR-2023) to UniProtKB.
RN   [2] {ECO:0000313|RefSeq:XP_004773561.1}
RP   IDENTIFICATION.
RC   TISSUE=Brain {ECO:0000313|RefSeq:XP_004773561.1};
RG   RefSeq;
RL   Submitted (SEP-2023) to UniProtKB.
CC   -!- SIMILARITY: Belongs to the WD repeat ATG16 family.
CC       {ECO:0000256|ARBA:ARBA00009271}.
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DR   EMBL; AEYP01081420; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; AEYP01081421; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   RefSeq; XP_004773561.1; XM_004773504.3.
DR   STRING; 9669.ENSMPUP00000005274; -.
DR   Ensembl; ENSMPUT00000005362.1; ENSMPUP00000005274.1; ENSMPUG00000005312.1.
DR   GeneID; 101690073; -.
DR   KEGG; mpuf:101690073; -.
DR   CTD; 55054; -.
DR   eggNOG; KOG0288; Eukaryota.
DR   GeneTree; ENSGT00940000153936; -.
DR   HOGENOM; CLU_000288_57_10_1; -.
DR   OMA; GRPCISP; -.
DR   OrthoDB; 458014at2759; -.
DR   Proteomes; UP000000715; Unplaced.
DR   GO; GO:0034274; C:Atg12-Atg5-Atg16 complex; IEA:Ensembl.
DR   GO; GO:0000421; C:autophagosome membrane; IEA:Ensembl.
DR   GO; GO:0005930; C:axoneme; IEA:Ensembl.
DR   GO; GO:0036020; C:endolysosome membrane; IEA:Ensembl.
DR   GO; GO:0034045; C:phagophore assembly site membrane; IEA:Ensembl.
DR   GO; GO:0097225; C:sperm midpiece; IEA:Ensembl.
DR   GO; GO:0120095; C:vacuole-isolation membrane contact site; IEA:Ensembl.
DR   GO; GO:0051020; F:GTPase binding; IEA:Ensembl.
DR   GO; GO:0042802; F:identical protein binding; IEA:Ensembl.
DR   GO; GO:0043495; F:protein-membrane adaptor activity; IEA:Ensembl.
DR   GO; GO:0022038; P:corpus callosum development; IEA:Ensembl.
DR   GO; GO:0051607; P:defense response to virus; IEA:Ensembl.
DR   GO; GO:0021766; P:hippocampus development; IEA:Ensembl.
DR   GO; GO:0016237; P:lysosomal microautophagy; IEA:Ensembl.
DR   GO; GO:0039689; P:negative stranded viral RNA replication; IEA:Ensembl.
DR   GO; GO:0010508; P:positive regulation of autophagy; IEA:Ensembl.
DR   GO; GO:0034497; P:protein localization to phagophore assembly site; IEA:Ensembl.
DR   GO; GO:0098792; P:xenophagy; IEA:Ensembl.
DR   CDD; cd22887; Atg16_CCD; 1.
DR   CDD; cd00200; WD40; 1.
DR   Gene3D; 1.20.5.170; -; 1.
DR   Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 2.
DR   InterPro; IPR045160; ATG16.
DR   InterPro; IPR013923; Autophagy-rel_prot_16_dom.
DR   InterPro; IPR020472; G-protein_beta_WD-40_rep.
DR   InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR   InterPro; IPR019775; WD40_repeat_CS.
DR   InterPro; IPR036322; WD40_repeat_dom_sf.
DR   InterPro; IPR001680; WD40_rpt.
DR   PANTHER; PTHR19878; AUTOPHAGY PROTEIN 16-LIKE; 1.
DR   PANTHER; PTHR19878:SF6; AUTOPHAGY-RELATED PROTEIN 16-1; 1.
DR   Pfam; PF08614; ATG16; 1.
DR   Pfam; PF00400; WD40; 5.
DR   PRINTS; PR00320; GPROTEINBRPT.
DR   SMART; SM00320; WD40; 7.
DR   SUPFAM; SSF50978; WD40 repeat-like; 1.
DR   PROSITE; PS00678; WD_REPEATS_1; 2.
DR   PROSITE; PS50082; WD_REPEATS_2; 6.
DR   PROSITE; PS50294; WD_REPEATS_REGION; 4.
PE   3: Inferred from homology;
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000715};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737};
KW   WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW   ProRule:PRU00221}.
FT   DOMAIN          16..206
FT                   /note="Autophagy-related protein 16"
FT                   /evidence="ECO:0000259|Pfam:PF08614"
FT   REPEAT          334..367
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   REPEAT          378..419
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   REPEAT          420..461
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   REPEAT          478..500
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   REPEAT          556..587
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   REPEAT          589..623
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   REGION          294..323
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COILED          82..230
FT                   /evidence="ECO:0000256|SAM:Coils"
SQ   SEQUENCE   623 AA;  70002 MW;  5BBA831B8058611E CRC64;
     MSSGLRAADF PRWKRHISEE LRRRDRLQRQ AFEEIILQYN KLLEKSDLHS VLAHKLQAEK
     HDIPNRHEIS PGHDAAWNDS QLQEMAQLRI KHQEELTELH KKRGELAQLV IDLNNQMQQK
     DREMQMNEAK IAECLQTISD LETECQELRS KLQDLERANQ TLKDEYDALQ ITFTALEEKL
     RKTTEENQEL VTRWMAEKAQ EANRLNAENE KDSRRRQARL QKELAEAAKE PLPVEQDDDI
     EVIVDETSDH TEETSPVRAL SRAATKRLSQ PAGGLLDSIT NIFGLSESPL LGHHSSDAAR
     RRSVSSFPVP QDNVDPHPGS SKEVRVPTTA MCVFDAHDGE VNAVQFSPGS RLLATGGMDR
     RVKLWEVFGD KCEFKGSLSG SNAGITSIEF DSAGSYLLAA SNDFASRIWT VDDYRLRHTL
     TGHSGKVLSA KFLLDNARIV SGSHDRTLKL WDLRSKVCIK TVFAGSSCND IVCTEQCVMS
     GHFDKKIRFW DIRSESIVRE MELLGKITAL DLNPERTELL SCSRDDLLKI IDLRINAVRQ
     TFSAPGFKCG SDWTRVVFSP DGGYVAAGSA EGSLYVWSVL SGKVEKVLSK QHGSSINAVA
     WSPSGSHVVS VDKGSKAVLW SEY
//
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