ID M3Y1S3_MUSPF Unreviewed; 623 AA.
AC M3Y1S3;
DT 01-MAY-2013, integrated into UniProtKB/TrEMBL.
DT 01-MAY-2013, sequence version 1.
DT 24-JAN-2024, entry version 63.
DE SubName: Full=Autophagy related 16 like 1 {ECO:0000313|Ensembl:ENSMPUP00000005274.1};
DE SubName: Full=Autophagy-related protein 16-1 isoform X1 {ECO:0000313|RefSeq:XP_004773561.1};
GN Name=ATG16L1 {ECO:0000313|Ensembl:ENSMPUP00000005274.1,
GN ECO:0000313|RefSeq:XP_004773561.1};
OS Mustela putorius furo (European domestic ferret) (Mustela furo).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae;
OC Mustelinae; Mustela.
OX NCBI_TaxID=9669 {ECO:0000313|Ensembl:ENSMPUP00000005274.1};
RN [1] {ECO:0000313|Ensembl:ENSMPUP00000005274.1}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (MAR-2023) to UniProtKB.
RN [2] {ECO:0000313|RefSeq:XP_004773561.1}
RP IDENTIFICATION.
RC TISSUE=Brain {ECO:0000313|RefSeq:XP_004773561.1};
RG RefSeq;
RL Submitted (SEP-2023) to UniProtKB.
CC -!- SIMILARITY: Belongs to the WD repeat ATG16 family.
CC {ECO:0000256|ARBA:ARBA00009271}.
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DR EMBL; AEYP01081420; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AEYP01081421; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR RefSeq; XP_004773561.1; XM_004773504.3.
DR STRING; 9669.ENSMPUP00000005274; -.
DR Ensembl; ENSMPUT00000005362.1; ENSMPUP00000005274.1; ENSMPUG00000005312.1.
DR GeneID; 101690073; -.
DR KEGG; mpuf:101690073; -.
DR CTD; 55054; -.
DR eggNOG; KOG0288; Eukaryota.
DR GeneTree; ENSGT00940000153936; -.
DR HOGENOM; CLU_000288_57_10_1; -.
DR OMA; GRPCISP; -.
DR OrthoDB; 458014at2759; -.
DR Proteomes; UP000000715; Unplaced.
DR GO; GO:0034274; C:Atg12-Atg5-Atg16 complex; IEA:Ensembl.
DR GO; GO:0000421; C:autophagosome membrane; IEA:Ensembl.
DR GO; GO:0005930; C:axoneme; IEA:Ensembl.
DR GO; GO:0036020; C:endolysosome membrane; IEA:Ensembl.
DR GO; GO:0034045; C:phagophore assembly site membrane; IEA:Ensembl.
DR GO; GO:0097225; C:sperm midpiece; IEA:Ensembl.
DR GO; GO:0120095; C:vacuole-isolation membrane contact site; IEA:Ensembl.
DR GO; GO:0051020; F:GTPase binding; IEA:Ensembl.
DR GO; GO:0042802; F:identical protein binding; IEA:Ensembl.
DR GO; GO:0043495; F:protein-membrane adaptor activity; IEA:Ensembl.
DR GO; GO:0022038; P:corpus callosum development; IEA:Ensembl.
DR GO; GO:0051607; P:defense response to virus; IEA:Ensembl.
DR GO; GO:0021766; P:hippocampus development; IEA:Ensembl.
DR GO; GO:0016237; P:lysosomal microautophagy; IEA:Ensembl.
DR GO; GO:0039689; P:negative stranded viral RNA replication; IEA:Ensembl.
DR GO; GO:0010508; P:positive regulation of autophagy; IEA:Ensembl.
DR GO; GO:0034497; P:protein localization to phagophore assembly site; IEA:Ensembl.
DR GO; GO:0098792; P:xenophagy; IEA:Ensembl.
DR CDD; cd22887; Atg16_CCD; 1.
DR CDD; cd00200; WD40; 1.
DR Gene3D; 1.20.5.170; -; 1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 2.
DR InterPro; IPR045160; ATG16.
DR InterPro; IPR013923; Autophagy-rel_prot_16_dom.
DR InterPro; IPR020472; G-protein_beta_WD-40_rep.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR PANTHER; PTHR19878; AUTOPHAGY PROTEIN 16-LIKE; 1.
DR PANTHER; PTHR19878:SF6; AUTOPHAGY-RELATED PROTEIN 16-1; 1.
DR Pfam; PF08614; ATG16; 1.
DR Pfam; PF00400; WD40; 5.
DR PRINTS; PR00320; GPROTEINBRPT.
DR SMART; SM00320; WD40; 7.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
DR PROSITE; PS00678; WD_REPEATS_1; 2.
DR PROSITE; PS50082; WD_REPEATS_2; 6.
DR PROSITE; PS50294; WD_REPEATS_REGION; 4.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000000715};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW ProRule:PRU00221}.
FT DOMAIN 16..206
FT /note="Autophagy-related protein 16"
FT /evidence="ECO:0000259|Pfam:PF08614"
FT REPEAT 334..367
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 378..419
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 420..461
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 478..500
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 556..587
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 589..623
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REGION 294..323
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 82..230
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 623 AA; 70002 MW; 5BBA831B8058611E CRC64;
MSSGLRAADF PRWKRHISEE LRRRDRLQRQ AFEEIILQYN KLLEKSDLHS VLAHKLQAEK
HDIPNRHEIS PGHDAAWNDS QLQEMAQLRI KHQEELTELH KKRGELAQLV IDLNNQMQQK
DREMQMNEAK IAECLQTISD LETECQELRS KLQDLERANQ TLKDEYDALQ ITFTALEEKL
RKTTEENQEL VTRWMAEKAQ EANRLNAENE KDSRRRQARL QKELAEAAKE PLPVEQDDDI
EVIVDETSDH TEETSPVRAL SRAATKRLSQ PAGGLLDSIT NIFGLSESPL LGHHSSDAAR
RRSVSSFPVP QDNVDPHPGS SKEVRVPTTA MCVFDAHDGE VNAVQFSPGS RLLATGGMDR
RVKLWEVFGD KCEFKGSLSG SNAGITSIEF DSAGSYLLAA SNDFASRIWT VDDYRLRHTL
TGHSGKVLSA KFLLDNARIV SGSHDRTLKL WDLRSKVCIK TVFAGSSCND IVCTEQCVMS
GHFDKKIRFW DIRSESIVRE MELLGKITAL DLNPERTELL SCSRDDLLKI IDLRINAVRQ
TFSAPGFKCG SDWTRVVFSP DGGYVAAGSA EGSLYVWSVL SGKVEKVLSK QHGSSINAVA
WSPSGSHVVS VDKGSKAVLW SEY
//