ID M4AEQ8_XIPMA Unreviewed; 1736 AA.
AC M4AEQ8;
DT 01-MAY-2013, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 2.
DT 08-NOV-2023, entry version 49.
DE SubName: Full=Collagen alpha-1(XVII) chain-like {ECO:0000313|Ensembl:ENSXMAP00000012952.2};
OS Xiphophorus maculatus (Southern platyfish) (Platypoecilus maculatus).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae;
OC Xiphophorus.
OX NCBI_TaxID=8083 {ECO:0000313|Ensembl:ENSXMAP00000012952.2, ECO:0000313|Proteomes:UP000002852};
RN [1] {ECO:0000313|Proteomes:UP000002852}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JP 163 A {ECO:0000313|Proteomes:UP000002852};
RA Walter R., Schartl M., Warren W.;
RL Submitted (JAN-2012) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Proteomes:UP000002852}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JP 163 A {ECO:0000313|Proteomes:UP000002852};
RX PubMed=23542700; DOI=10.1038/ng.2604;
RA Schartl M., Walter R.B., Shen Y., Garcia T., Catchen J., Amores A.,
RA Braasch I., Chalopin D., Volff J.N., Lesch K.P., Bisazza A., Minx P.,
RA Hillier L., Wilson R.K., Fuerstenberg S., Boore J., Searle S.,
RA Postlethwait J.H., Warren W.C.;
RT "The genome of the platyfish, Xiphophorus maculatus, provides insights into
RT evolutionary adaptation and several complex traits.";
RL Nat. Genet. 45:567-572(2013).
RN [3] {ECO:0000313|Ensembl:ENSXMAP00000012952.2}
RP IDENTIFICATION.
RC STRAIN=JP 163 A {ECO:0000313|Ensembl:ENSXMAP00000012952.2};
RG Ensembl;
RL Submitted (JUL-2023) to UniProtKB.
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DR STRING; 8083.ENSXMAP00000012952; -.
DR Ensembl; ENSXMAT00000012968.2; ENSXMAP00000012952.2; ENSXMAG00000012914.2.
DR eggNOG; KOG3544; Eukaryota.
DR GeneTree; ENSGT00940000163514; -.
DR HOGENOM; CLU_004285_0_0_1; -.
DR InParanoid; M4AEQ8; -.
DR OMA; ELWLFVR; -.
DR Proteomes; UP000002852; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR Gene3D; 1.20.5.320; 6-Phosphogluconate Dehydrogenase, domain 3; 3.
DR InterPro; IPR008160; Collagen.
DR PANTHER; PTHR24023; COLLAGEN ALPHA; 1.
DR PANTHER; PTHR24023:SF1074; LAM_G_DOMAIN DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF01391; Collagen; 4.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils}; Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000002852};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 587..611
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT REGION 1..52
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 81..199
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 226..252
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 715..749
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 822..1254
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1270..1293
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1349..1371
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1394..1415
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1439..1470
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1486..1516
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1534..1563
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1665..1736
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 608..635
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 12..52
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 111..146
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 162..176
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 227..243
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 715..745
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1061..1090
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1106..1123
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1132..1165
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1446..1460
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1689..1703
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1736 AA; 173106 MW; 4EFB83B909D7C4A9 CRC64;
MDELTRQMEI SGEKVLTETV TSTTRLTSLP PKGTSGSNHR NMSSSAGGLG FEKNVLTQNS
SGTYFSSSSI GVTSNYSSSS GIYLGGDSSG GGEGGGSYID GEGYGSGGGG RGGSSGSTYL
VSSVSKVRSS SSGGARRAQT GGSSVGLSPG FRERKAIASR SGGYDGSSSG NSSPEFPRKD
YGNYCSGATR GRSESRESEI RARLQSASPS AGRWAELEDV KKLLKGRSSS VSPTRSSASV
TLPVPKKASV ETKTVSVGTQ SASTLFEPVV QTNGFHTIDV SGLYDSRLTS RQRDSGVQAG
QHTVTVKSCH CDAGVKSSQY DVSLGSGQYD TGLKSGRYDM SLKSGQYDTT GRSGQYDTLD
SAFPTFSWST STLPSSTTVV AGNPTSYTYQ LGQVSANNMS GGSPPLSPVP QQSLSVYGFQ
NNLAPASVGV LTTSGGNVTA NLGGYGVQKN VANGSAVISS GISTATRSQI DDVYKRDYRY
MASDKENVPA RREGEMLILA KDSGKQFTTT SSTHMGGGSL SGDSIKKEKL ISSYVDTGTL
KAETGNSYYG TSGVLMKDKA TYAEIHRDGG VFGGGGLCCC SDSCCSWWKW LLGLLLLCLL
LLGLLFGLIA LAEDVRKLKK QVSTLENEVS VANARTSRLS AGSSNDVNTY VSGGGGGGGT
GTDNTLILGF GGAGGGGSDS KTQIRIAGAG AGGSASRNDV DVGVVGVGGA GGAVGAGTSS
SSSSGTSFSG SAGSAGTSLS GGAGSAGTDG VSAGGASFGG GTGSSGTSFV IGTGGGTSGD
VGTGVRGRYI DSAYLQMAIH QMLKSEMQSQ AFRGFLASSV QGERGLPGPK GDSGLKGEPG
FPGNPGAPGP MGHAGPEGPK GQKGSQGEQG VEGPPGVRGR EGLPGPRGDL GPAGFGLKGD
KGEAGSVGSA GAPGQKGAQG IQGPPGPQGF RGEAGLPGPK GDRGLAGFQG LKGETGEKGI
RGLQGEPGLP GPAGEKGSKG SMGLSGQDGE KGSRGDQGPH GPPGLRGSAG PPGDAGLPGT
PGLQGPPGIP GNPGQPGAKG EPGQAGRIIN AAGSTSVGIP GPPGPAGPPG PAGSPGLSGP
IGPAGLPGPP GPKGDRGYKG EQGETGITRG TISSSTAERT FGAGGSSSFR GIPGPPGPPG
PPGRPGDSRQ GPPGPPGPPG QPGYGIPGPK GEKGDVGFAS SSGTYYTGPP GPPGQPGQPG
PKGATGSPGP RGYTGDTGAP GIPGASRGSV SVTSGPAGPP GPPGPPGLPG SFASSTEMRQ
YISDYLSRYR LSSLPGPPGP PGPPGLPGTF SGSIDDISTR IIAYLRRSDS GFSIGVQGPP
GPPGPPGPAS GSLTVNALIT MLQRDDVRRY LSGPPGPQGP PGPPGASGGL SGTYRVEEIA
TYVFNIMNER GIARGPPGPR GLPGPPGAPG AGGSGFTTAT IDYSALIRNS DFRSWITSAV
QQGPPGAPGL PGPPGPQGPP GVSTATVYGS GGRGYSLEEI QRYLQGSGFR GLPGPPGPPG
PQGPPGAVTG SVSYSGNLPR ESIRAEIQQY LSSDSVRRTI VGPPGPQGPK GQKGERGEPG
YSQSYIQSHS YQQSDGSYGS QRRDVDVSRL SETLDYSNVA MKVTDYIKNQ GLLQQYISDG
SWRTNVRAIQ GPPGPPGPPG PPGYSRVIGS YGNVTADLMD FFRRYGTVPG APGSPGPKGD
RGHPGPKGDK GDPGPPGLPG IPAPLTVQIP HKVQKREAGD KGAVRQKRRR RQAGFG
//