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Database: UniProt
Entry: M4AEQ8_XIPMA
LinkDB: M4AEQ8_XIPMA
Original site: M4AEQ8_XIPMA 
ID   M4AEQ8_XIPMA            Unreviewed;      1736 AA.
AC   M4AEQ8;
DT   01-MAY-2013, integrated into UniProtKB/TrEMBL.
DT   05-DEC-2018, sequence version 2.
DT   08-NOV-2023, entry version 49.
DE   SubName: Full=Collagen alpha-1(XVII) chain-like {ECO:0000313|Ensembl:ENSXMAP00000012952.2};
OS   Xiphophorus maculatus (Southern platyfish) (Platypoecilus maculatus).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC   Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae;
OC   Xiphophorus.
OX   NCBI_TaxID=8083 {ECO:0000313|Ensembl:ENSXMAP00000012952.2, ECO:0000313|Proteomes:UP000002852};
RN   [1] {ECO:0000313|Proteomes:UP000002852}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=JP 163 A {ECO:0000313|Proteomes:UP000002852};
RA   Walter R., Schartl M., Warren W.;
RL   Submitted (JAN-2012) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|Proteomes:UP000002852}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=JP 163 A {ECO:0000313|Proteomes:UP000002852};
RX   PubMed=23542700; DOI=10.1038/ng.2604;
RA   Schartl M., Walter R.B., Shen Y., Garcia T., Catchen J., Amores A.,
RA   Braasch I., Chalopin D., Volff J.N., Lesch K.P., Bisazza A., Minx P.,
RA   Hillier L., Wilson R.K., Fuerstenberg S., Boore J., Searle S.,
RA   Postlethwait J.H., Warren W.C.;
RT   "The genome of the platyfish, Xiphophorus maculatus, provides insights into
RT   evolutionary adaptation and several complex traits.";
RL   Nat. Genet. 45:567-572(2013).
RN   [3] {ECO:0000313|Ensembl:ENSXMAP00000012952.2}
RP   IDENTIFICATION.
RC   STRAIN=JP 163 A {ECO:0000313|Ensembl:ENSXMAP00000012952.2};
RG   Ensembl;
RL   Submitted (JUL-2023) to UniProtKB.
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DR   STRING; 8083.ENSXMAP00000012952; -.
DR   Ensembl; ENSXMAT00000012968.2; ENSXMAP00000012952.2; ENSXMAG00000012914.2.
DR   eggNOG; KOG3544; Eukaryota.
DR   GeneTree; ENSGT00940000163514; -.
DR   HOGENOM; CLU_004285_0_0_1; -.
DR   InParanoid; M4AEQ8; -.
DR   OMA; ELWLFVR; -.
DR   Proteomes; UP000002852; Unassembled WGS sequence.
DR   GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR   Gene3D; 1.20.5.320; 6-Phosphogluconate Dehydrogenase, domain 3; 3.
DR   InterPro; IPR008160; Collagen.
DR   PANTHER; PTHR24023; COLLAGEN ALPHA; 1.
DR   PANTHER; PTHR24023:SF1074; LAM_G_DOMAIN DOMAIN-CONTAINING PROTEIN; 1.
DR   Pfam; PF01391; Collagen; 4.
PE   4: Predicted;
KW   Coiled coil {ECO:0000256|SAM:Coils}; Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000002852};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM        587..611
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   REGION          1..52
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          81..199
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          226..252
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          715..749
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          822..1254
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1270..1293
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1349..1371
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1394..1415
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1439..1470
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1486..1516
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1534..1563
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1665..1736
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COILED          608..635
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COMPBIAS        12..52
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        111..146
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        162..176
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        227..243
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        715..745
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1061..1090
FT                   /note="Pro residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1106..1123
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1132..1165
FT                   /note="Pro residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1446..1460
FT                   /note="Pro residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1689..1703
FT                   /note="Pro residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   1736 AA;  173106 MW;  4EFB83B909D7C4A9 CRC64;
     MDELTRQMEI SGEKVLTETV TSTTRLTSLP PKGTSGSNHR NMSSSAGGLG FEKNVLTQNS
     SGTYFSSSSI GVTSNYSSSS GIYLGGDSSG GGEGGGSYID GEGYGSGGGG RGGSSGSTYL
     VSSVSKVRSS SSGGARRAQT GGSSVGLSPG FRERKAIASR SGGYDGSSSG NSSPEFPRKD
     YGNYCSGATR GRSESRESEI RARLQSASPS AGRWAELEDV KKLLKGRSSS VSPTRSSASV
     TLPVPKKASV ETKTVSVGTQ SASTLFEPVV QTNGFHTIDV SGLYDSRLTS RQRDSGVQAG
     QHTVTVKSCH CDAGVKSSQY DVSLGSGQYD TGLKSGRYDM SLKSGQYDTT GRSGQYDTLD
     SAFPTFSWST STLPSSTTVV AGNPTSYTYQ LGQVSANNMS GGSPPLSPVP QQSLSVYGFQ
     NNLAPASVGV LTTSGGNVTA NLGGYGVQKN VANGSAVISS GISTATRSQI DDVYKRDYRY
     MASDKENVPA RREGEMLILA KDSGKQFTTT SSTHMGGGSL SGDSIKKEKL ISSYVDTGTL
     KAETGNSYYG TSGVLMKDKA TYAEIHRDGG VFGGGGLCCC SDSCCSWWKW LLGLLLLCLL
     LLGLLFGLIA LAEDVRKLKK QVSTLENEVS VANARTSRLS AGSSNDVNTY VSGGGGGGGT
     GTDNTLILGF GGAGGGGSDS KTQIRIAGAG AGGSASRNDV DVGVVGVGGA GGAVGAGTSS
     SSSSGTSFSG SAGSAGTSLS GGAGSAGTDG VSAGGASFGG GTGSSGTSFV IGTGGGTSGD
     VGTGVRGRYI DSAYLQMAIH QMLKSEMQSQ AFRGFLASSV QGERGLPGPK GDSGLKGEPG
     FPGNPGAPGP MGHAGPEGPK GQKGSQGEQG VEGPPGVRGR EGLPGPRGDL GPAGFGLKGD
     KGEAGSVGSA GAPGQKGAQG IQGPPGPQGF RGEAGLPGPK GDRGLAGFQG LKGETGEKGI
     RGLQGEPGLP GPAGEKGSKG SMGLSGQDGE KGSRGDQGPH GPPGLRGSAG PPGDAGLPGT
     PGLQGPPGIP GNPGQPGAKG EPGQAGRIIN AAGSTSVGIP GPPGPAGPPG PAGSPGLSGP
     IGPAGLPGPP GPKGDRGYKG EQGETGITRG TISSSTAERT FGAGGSSSFR GIPGPPGPPG
     PPGRPGDSRQ GPPGPPGPPG QPGYGIPGPK GEKGDVGFAS SSGTYYTGPP GPPGQPGQPG
     PKGATGSPGP RGYTGDTGAP GIPGASRGSV SVTSGPAGPP GPPGPPGLPG SFASSTEMRQ
     YISDYLSRYR LSSLPGPPGP PGPPGLPGTF SGSIDDISTR IIAYLRRSDS GFSIGVQGPP
     GPPGPPGPAS GSLTVNALIT MLQRDDVRRY LSGPPGPQGP PGPPGASGGL SGTYRVEEIA
     TYVFNIMNER GIARGPPGPR GLPGPPGAPG AGGSGFTTAT IDYSALIRNS DFRSWITSAV
     QQGPPGAPGL PGPPGPQGPP GVSTATVYGS GGRGYSLEEI QRYLQGSGFR GLPGPPGPPG
     PQGPPGAVTG SVSYSGNLPR ESIRAEIQQY LSSDSVRRTI VGPPGPQGPK GQKGERGEPG
     YSQSYIQSHS YQQSDGSYGS QRRDVDVSRL SETLDYSNVA MKVTDYIKNQ GLLQQYISDG
     SWRTNVRAIQ GPPGPPGPPG PPGYSRVIGS YGNVTADLMD FFRRYGTVPG APGSPGPKGD
     RGHPGPKGDK GDPGPPGLPG IPAPLTVQIP HKVQKREAGD KGAVRQKRRR RQAGFG
//
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