ID M4NLU6_9GAMM Unreviewed; 726 AA.
AC M4NLU6;
DT 29-MAY-2013, integrated into UniProtKB/TrEMBL.
DT 29-MAY-2013, sequence version 1.
DT 24-JAN-2024, entry version 47.
DE SubName: Full=Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:AGG90638.1};
GN ORFNames=R2APBS1_3575 {ECO:0000313|EMBL:AGG90638.1};
OS Rhodanobacter denitrificans.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Xanthomonadales;
OC Rhodanobacteraceae; Rhodanobacter.
OX NCBI_TaxID=666685 {ECO:0000313|EMBL:AGG90638.1, ECO:0000313|Proteomes:UP000011859};
RN [1] {ECO:0000313|EMBL:AGG90638.1, ECO:0000313|Proteomes:UP000011859}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=2APBS1 {ECO:0000313|EMBL:AGG90638.1,
RC ECO:0000313|Proteomes:UP000011859};
RG US DOE Joint Genome Institute;
RA Huntemann M., Wei C.-L., Han J., Detter J.C., Han C., Tapia R.,
RA Munk A.C.C., Chen A., Krypides N., Mavromatis K., Markowitz V., Szeto E.,
RA Ivanova N., Mikhailova N., Ovchinnikova G., Pagani I., Pati A., Goodwin L.,
RA Peters L., Pitluck S., Woyke T., Prakash O., Elkins J., Brown S.,
RA Palumbo A., Hemme C., Zhou J., Watson D., Jardine P., Kostka J., Green S.;
RT "Complete genome of Rhodanobacter sp. 2APBS1.";
RL Submitted (APR-2012) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CP003470; AGG90638.1; -; Genomic_DNA.
DR RefSeq; WP_015448919.1; NZ_CP088918.1.
DR AlphaFoldDB; M4NLU6; -.
DR STRING; 666685.R2APBS1_3575; -.
DR KEGG; rhd:R2APBS1_3575; -.
DR eggNOG; COG5001; Bacteria.
DR HOGENOM; CLU_000445_70_49_6; -.
DR OrthoDB; 9804951at2; -.
DR Proteomes; UP000011859; Chromosome.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR CDD; cd01948; EAL; 1.
DR CDD; cd01949; GGDEF; 1.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 3.20.20.450; EAL domain; 1.
DR InterPro; IPR001633; EAL_dom.
DR InterPro; IPR035919; EAL_sf.
DR InterPro; IPR000160; GGDEF_dom.
DR InterPro; IPR029787; Nucleotide_cyclase.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR NCBIfam; TIGR00254; GGDEF; 1.
DR PANTHER; PTHR33121; CYCLIC DI-GMP PHOSPHODIESTERASE PDEF; 1.
DR PANTHER; PTHR33121:SF70; CYCLIC DI-GMP PHOSPHODIESTERASE PDEH; 1.
DR Pfam; PF00563; EAL; 1.
DR Pfam; PF00990; GGDEF; 1.
DR SMART; SM00052; EAL; 1.
DR SMART; SM00267; GGDEF; 1.
DR SUPFAM; SSF141868; EAL domain-like; 1.
DR SUPFAM; SSF55073; Nucleotide cyclase; 1.
DR PROSITE; PS50883; EAL; 1.
DR PROSITE; PS50887; GGDEF; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils}; Membrane {ECO:0000256|SAM:Phobius};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 25..52
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 59..79
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 91..110
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 122..146
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 166..189
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 201..220
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 232..253
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 317..455
FT /note="GGDEF"
FT /evidence="ECO:0000259|PROSITE:PS50887"
FT DOMAIN 464..721
FT /note="EAL"
FT /evidence="ECO:0000259|PROSITE:PS50883"
FT COILED 252..282
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 726 AA; 78821 MW; E713E21832B46836 CRC64;
MIDDYASAAR TWGEGMLIGA DPSAFGYFIA ALIATTGIAF ASGVQFVVIG LWRRREAVYL
SYAALCLCIA VLALGNMRLA RADGLAAATA ALHWMIAAAI ASLAPMVVFI RAYTGAGTRW
RLLLAMSLLM VVLLCVNGSA PATLFFSRLE PGQAIVLPWG ERLYRVSGAA SAWGLAFHVA
SYAVFLWALG RAWAQYRGGD TLRAVLLGGC LIVQFVVLLW GDIMVDLLGY QAPYLDAFAF
LPFVLLMSLS LAAQMRRRTA QLEHTRRQLE VEEHTRHAAE QNLRHLAYHD SLTGLPNRAC
ALKRLAESRA DALARGVCGA LLLIDLDNFK TINDGLGHHV GDRLLQAMAE RLLAAAPPEA
TLARLGGDEF VLMLGLRERT PSEVQARAER VAQDVIALVS EPVMEGRHVL GVGASVGVAV
YPVGEVGVAD LLRRADIALY RAKAAGRNTV RVFLPPMQQE ADQRLRLERG LREALEQDRM
GTQFALHFQP QITTAGELLG AEALLRWHHP QLGEVAPEKF IPLAEETGLI HALGAWVVDE
ACAHLRAWDR DGIPHGGSLA VNVSAWQLVH PHYAARLVAQ VHAAGVAPAR LTLELTESAL
LQDFDGAQAT LRRLAAAGFR LALDDFGVGY SSLNYLQHLP LDVLKIDRAF VSELQVEAGN
PLAGFIIDMA HRLGIVAVAE GVETAFQRQA LEQMGCDALQ GYLISRPVDD ASFRRWVVAH
RHAPVS
//