ID M5CCP2_THACB Unreviewed; 850 AA.
AC M5CCP2;
DT 29-MAY-2013, integrated into UniProtKB/TrEMBL.
DT 29-MAY-2013, sequence version 1.
DT 24-JAN-2024, entry version 44.
DE SubName: Full=Retrotransposable element Tf2 155 kDa protein type 1 {ECO:0000313|EMBL:CCO36910.1};
GN ORFNames=BN14_11057 {ECO:0000313|EMBL:CCO36910.1};
OS Thanatephorus cucumeris (strain AG1-IB / isolate 7/3/14) (Lettuce bottom
OS rot fungus) (Rhizoctonia solani).
OC Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes;
OC Cantharellales; Ceratobasidiaceae; Rhizoctonia; Rhizoctonia solani AG-1.
OX NCBI_TaxID=1108050 {ECO:0000313|EMBL:CCO36910.1, ECO:0000313|Proteomes:UP000012065};
RN [1] {ECO:0000313|EMBL:CCO36910.1, ECO:0000313|Proteomes:UP000012065}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AG1-IB / isolate 7/3/14 {ECO:0000313|Proteomes:UP000012065};
RX PubMed=23280342; DOI=10.1016/j.jbiotec.2012.12.010;
RA Wibberg D.W., Jelonek L.J., Rupp O.R., Hennig M.H., Eikmeyer F.E.,
RA Goesmann A.G., Hartmann A.H., Borriss R.B., Grosch R.G., Puehler A.P.,
RA Schlueter A.S.;
RT "Establishment and interpretation of the genome sequence of the
RT phytopathogenic fungus Rhizoctonia solani AG1-IB isolate 7/3/14.";
RL J. Biotechnol. 0:0-0(2013).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CCO36910.1}.
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DR EMBL; CAOJ01016549; CCO36910.1; -; Genomic_DNA.
DR AlphaFoldDB; M5CCP2; -.
DR HOGENOM; CLU_000384_38_1_1; -.
DR Proteomes; UP000012065; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProt.
DR GO; GO:1901363; F:heterocyclic compound binding; IEA:UniProt.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR CDD; cd00024; CD_CSD; 1.
DR CDD; cd09274; RNase_HI_RT_Ty3; 1.
DR CDD; cd01647; RT_LTR; 1.
DR Gene3D; 1.10.340.70; -; 1.
DR Gene3D; 2.40.50.40; -; 1.
DR Gene3D; 3.10.20.370; -; 1.
DR Gene3D; 3.30.70.270; -; 2.
DR Gene3D; 3.10.10.10; HIV Type 1 Reverse Transcriptase, subunit A, domain 1; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR016197; Chromo-like_dom_sf.
DR InterPro; IPR000953; Chromo/chromo_shadow_dom.
DR InterPro; IPR023780; Chromo_domain.
DR InterPro; IPR023779; Chromodomain_CS.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR001584; Integrase_cat-core.
DR InterPro; IPR041588; Integrase_H2C2.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR000477; RT_dom.
DR InterPro; IPR041373; RT_RNaseH.
DR PANTHER; PTHR24559:SF425; RT_RNASEH DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR24559; TRANSPOSON TY3-I GAG-POL POLYPROTEIN; 1.
DR Pfam; PF00385; Chromo; 1.
DR Pfam; PF17921; Integrase_H2C2; 1.
DR Pfam; PF17917; RT_RNaseH; 1.
DR Pfam; PF00665; rve; 1.
DR Pfam; PF00078; RVT_1; 1.
DR SMART; SM00298; CHROMO; 1.
DR SUPFAM; SSF54160; Chromo domain-like; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS00598; CHROMO_1; 1.
DR PROSITE; PS50013; CHROMO_2; 1.
DR PROSITE; PS50994; INTEGRASE; 1.
DR PROSITE; PS50878; RT_POL; 1.
PE 4: Predicted;
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884};
KW Transposable element {ECO:0000256|ARBA:ARBA00022464}.
FT DOMAIN 1..123
FT /note="Reverse transcriptase"
FT /evidence="ECO:0000259|PROSITE:PS50878"
FT DOMAIN 488..647
FT /note="Integrase catalytic"
FT /evidence="ECO:0000259|PROSITE:PS50994"
FT DOMAIN 789..850
FT /note="Chromo"
FT /evidence="ECO:0000259|PROSITE:PS50013"
SQ SEQUENCE 850 AA; 97890 MW; FEA35E73EEC0A043 CRC64;
MGAKIFTKFD LKAGYNLVRI KEGDEWKTAF KTKYGLFEYL VMPFGLTNAP ASFQDMMNSI
FIDLLDVCVI IYLDDILIFS KDESSHEEHV REVLRRLKDN DLFCNIEKCS FHVKKINYLG
FIISEDGVEV DQSKVTAALQ WSSPKNVKNV QEFLGFVNFY RRFVPDFNKI AHPLYDLLKK
DSIWNWSLAA QNSFDQLKEK LTTAPLLIQP DVTKQFFLEC DASDYATGAI LSQKNLEGKL
HPVAYLSKSL APAERNYDIF DKELLAVIRA LKEWRHLLEG SELPIQILTD HKNLEYFSTS
QSLNKRQIRW ANFLVDYNFQ IIYRPGSQNK KADILSRRYD LVPLEGGVEN QVLLKPDFFI
ASITPDQEIN DLIGEAIYED PRSKEVLDTI KKGKKVQDWE LKEGLLWLKG KIFVPKDETI
RNLILESRHD ALAAGHPGQA RTLELISRTY YWSSMKKFVN SYVNHCKTCI RAKPTNQLPV
GLLKPLQTPE RPWEDIAYDM IVGLPSSEGF DAILTVIDRF SKMVHLIPTH STASAIDIAN
LFVTYVWKLH GLPRSTVSDR GPTFNAKFIR HLYQRLDIKP TFSTAYHPQT DGQTERIQRE
VEIFIRMFGN HRQSDWVSLL PLAEFACNNN LQTSTGKSPF QICYGINPKF SIGQHTNNDV
PNAEEHADFL EKGYDEVKAA LTLAQERMKR FYDQRHRDIE PITVGDKVWL SHQNISTDRP
SIKLSHKKLG PYLVLEKIGS HAFKLSLPHT MHIHPVFHVN LLQKFHPDPH GRDPHQPPPI
ITEEGEEEYE VEEILDSKWK GRGKNKKIWY LIKWVGYDAG SNSWEPADNV GNAEEAIQEF
HKKFPEAVGP
//