ID M5VY08_PRUPE Unreviewed; 290 AA.
AC M5VY08;
DT 29-MAY-2013, integrated into UniProtKB/TrEMBL.
DT 29-MAY-2013, sequence version 1.
DT 24-JAN-2024, entry version 46.
DE RecName: Full=DNA-directed RNA polymerase RpoA/D/Rpb3-type domain-containing protein {ECO:0000259|SMART:SM00662};
GN ORFNames=PRUPE_8G132400 {ECO:0000313|EMBL:ONH91714.1};
OS Prunus persica (Peach) (Amygdalus persica).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus.
OX NCBI_TaxID=3760 {ECO:0000313|EMBL:ONH91714.1, ECO:0000313|Proteomes:UP000006882};
RN [1] {ECO:0000313|EMBL:ONH91714.1, ECO:0000313|Proteomes:UP000006882}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nemared {ECO:0000313|Proteomes:UP000006882};
RX PubMed=23525075; DOI=10.1038/ng.2586;
RA Verde I., Abbott A.G., Scalabrin S., Jung S., Shu S., Marroni F.,
RA Zhebentyayeva T., Dettori M.T., Grimwood J., Cattonaro F., Zuccolo A.,
RA Rossini L., Jenkins J., Vendramin E., Meisel L.A., Decroocq V.,
RA Sosinski B., Prochnik S., Mitros T., Policriti A., Cipriani G., Dondini L.,
RA Ficklin S., Goodstein D.M., Xuan P., Del Fabbro C., Aramini V., Copetti D.,
RA Gonzalez S., Horner D.S., Falchi R., Lucas S., Mica E., Maldonado J.,
RA Lazzari B., Bielenberg D., Pirona R., Miculan M., Barakat A., Testolin R.,
RA Stella A., Tartarini S., Tonutti P., Arus P., Orellana A., Wells C.,
RA Main D., Vizzotto G., Silva H., Salamini F., Schmutz J., Morgante M.,
RA Rokhsar D.S.;
RT "The high-quality draft genome of peach (Prunus persica) identifies unique
RT patterns of genetic diversity, domestication and genome evolution.";
RL Nat. Genet. 45:487-494(2013).
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DR EMBL; CM007658; ONH91714.1; -; Genomic_DNA.
DR RefSeq; XP_007200659.1; XM_007200597.1.
DR AlphaFoldDB; M5VY08; -.
DR STRING; 3760.M5VY08; -.
DR EnsemblPlants; ONH91714; ONH91714; PRUPE_8G132400.
DR Gramene; ONH91714; ONH91714; PRUPE_8G132400.
DR eggNOG; KOG1522; Eukaryota.
DR HOGENOM; CLU_038421_3_0_1; -.
DR OMA; HDSFVFT; -.
DR Proteomes; UP000006882; Chromosome g8.
DR GO; GO:0005665; C:RNA polymerase II, core complex; IBA:GO_Central.
DR GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:InterPro.
DR GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR GO; GO:0006366; P:transcription by RNA polymerase II; IEA:GOC.
DR Gene3D; 3.30.1360.10; RNA polymerase, RBP11-like subunit; 2.
DR InterPro; IPR011263; DNA-dir_RNA_pol_RpoA/D/Rpb3.
DR InterPro; IPR036603; RBP11-like.
DR InterPro; IPR036643; RNApol_insert_sf.
DR PANTHER; PTHR11800; DNA-DIRECTED RNA POLYMERASE; 1.
DR PANTHER; PTHR11800:SF2; DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB3; 1.
DR Pfam; PF01193; RNA_pol_L; 1.
DR SMART; SM00662; RPOLD; 1.
DR SUPFAM; SSF56553; Insert subdomain of RNA polymerase alpha subunit; 1.
DR SUPFAM; SSF55257; RBP11-like subunits of RNA polymerase; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000006882}.
FT DOMAIN 21..270
FT /note="DNA-directed RNA polymerase RpoA/D/Rpb3-type"
FT /evidence="ECO:0000259|SMART:SM00662"
SQ SEQUENCE 290 AA; 32158 MW; 774F3E68F318C3A8 CRC64;
MEGKSYQRLL RVKIREMRDD YMKFELRDAD ASVANALRRV MIAEVPTVAI DLVEIQINSL
GLIPLTSDQA MSMRFSSDCD SCDGDGQCEF CSVEFHLRGK CHSDQTPDFT IKDLLSSDHT
VVPVDFSDSA GMESSKQKDN HCEVAKGARA DSSAATVTFM YEPDIQINEE LMDMLTLDEK
KAWVESSPTK VFDFDPKTEK VVVVDPEAYT YDDEVIKKAE AMGKPGLVDI IAKEDSFIFT
VESTGAVKAS QLLLNAIEVL NQKLDAVRLS EDTVEADDQF GELGAHMRGG
//
