ID M5XMX5_PRUPE Unreviewed; 440 AA.
AC M5XMX5;
DT 29-MAY-2013, integrated into UniProtKB/TrEMBL.
DT 29-MAY-2013, sequence version 1.
DT 27-MAR-2024, entry version 56.
DE RecName: Full=RNA polymerase sigma-70 domain-containing protein {ECO:0000259|PROSITE:PS00715};
GN ORFNames=PRUPE_2G021900 {ECO:0000313|EMBL:ONI20543.1};
OS Prunus persica (Peach) (Amygdalus persica).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus.
OX NCBI_TaxID=3760 {ECO:0000313|EMBL:ONI20543.1, ECO:0000313|Proteomes:UP000006882};
RN [1] {ECO:0000313|EMBL:ONI20543.1, ECO:0000313|Proteomes:UP000006882}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nemared {ECO:0000313|Proteomes:UP000006882};
RX PubMed=23525075; DOI=10.1038/ng.2586;
RA Verde I., Abbott A.G., Scalabrin S., Jung S., Shu S., Marroni F.,
RA Zhebentyayeva T., Dettori M.T., Grimwood J., Cattonaro F., Zuccolo A.,
RA Rossini L., Jenkins J., Vendramin E., Meisel L.A., Decroocq V.,
RA Sosinski B., Prochnik S., Mitros T., Policriti A., Cipriani G., Dondini L.,
RA Ficklin S., Goodstein D.M., Xuan P., Del Fabbro C., Aramini V., Copetti D.,
RA Gonzalez S., Horner D.S., Falchi R., Lucas S., Mica E., Maldonado J.,
RA Lazzari B., Bielenberg D., Pirona R., Miculan M., Barakat A., Testolin R.,
RA Stella A., Tartarini S., Tonutti P., Arus P., Orellana A., Wells C.,
RA Main D., Vizzotto G., Silva H., Salamini F., Schmutz J., Morgante M.,
RA Rokhsar D.S.;
RT "The high-quality draft genome of peach (Prunus persica) identifies unique
RT patterns of genetic diversity, domestication and genome evolution.";
RL Nat. Genet. 45:487-494(2013).
CC -!- SIMILARITY: Belongs to the sigma-70 factor family.
CC {ECO:0000256|ARBA:ARBA00007788}.
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DR EMBL; CM007652; ONI20543.1; -; Genomic_DNA.
DR RefSeq; XP_007219201.1; XM_007219139.1.
DR AlphaFoldDB; M5XMX5; -.
DR STRING; 3760.M5XMX5; -.
DR EnsemblPlants; ONI20543; ONI20543; PRUPE_2G021900.
DR GeneID; 18786154; -.
DR Gramene; ONI20543; ONI20543; PRUPE_2G021900.
DR KEGG; pper:18786154; -.
DR eggNOG; ENOG502QPRS; Eukaryota.
DR HOGENOM; CLU_014793_3_4_1; -.
DR OMA; AFFKEMA; -.
DR OrthoDB; 33789at2759; -.
DR Proteomes; UP000006882; Chromosome g2.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR GO; GO:0071482; P:cellular response to light stimulus; IEA:EnsemblPlants.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR CDD; cd06171; Sigma70_r4; 1.
DR Gene3D; 1.20.120.1810; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 2.
DR InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR InterPro; IPR000943; RNA_pol_sigma70.
DR InterPro; IPR007627; RNA_pol_sigma70_r2.
DR InterPro; IPR007624; RNA_pol_sigma70_r3.
DR InterPro; IPR007630; RNA_pol_sigma70_r4.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR NCBIfam; TIGR02937; sigma70-ECF; 1.
DR PANTHER; PTHR30603; RNA POLYMERASE SIGMA FACTOR RPO; 1.
DR PANTHER; PTHR30603:SF70; RNA POLYMERASE SIGMA FACTOR SIGD, CHLOROPLASTIC; 1.
DR Pfam; PF04542; Sigma70_r2; 1.
DR Pfam; PF04539; Sigma70_r3; 1.
DR Pfam; PF04545; Sigma70_r4; 1.
DR PRINTS; PR00046; SIGMA70FCT.
DR SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
DR SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 2.
DR PROSITE; PS00715; SIGMA70_1; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000006882};
KW Sigma factor {ECO:0000256|ARBA:ARBA00023082};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 231..244
FT /note="RNA polymerase sigma-70"
FT /evidence="ECO:0000259|PROSITE:PS00715"
SQ SEQUENCE 440 AA; 49553 MW; FE2E0525E33FB8F3 CRC64;
MAITTSICSS PNQPPILPTL SLPTIPFTPL KTHHPLQLHL PFPSSSSKSG GNLVSNDALA
IAAAAEALVL ARAAVEAAID AVAVTEDIGE VWSCWESGNE SGGLVARRKR RRKRRKGLEA
LDEEMKRDVE DGMVSFGFVR YEHLSPREEA ECCLSLKEGA RLESERFRVV EAQKHEPTSK
QLAKAMGMKM RSIDKVLCKR RESQEKIIRS YRGLVVSVAS SYQGKGLSFQ DLIQEGSIGL
LRGAEKFDHE REWKLSTYVY WWIRQAIIRA IENKSRIIRL PGHVCGMMAK ITKAQNSLNQ
RFQRLPSHDE IAEVIKVNAS TVKLVCERSR PPISLDRVAT VRGSMTLQEI IQGPEEMMPE
KMLIRQLMKQ EVEKLLKTLS DREANVLRLH FGLNGESPQS FEEIGRLLKL SRERVRQING
IALSKLRQTS ILDNLKLYIV
//
