ID M7NSL3_9BACT Unreviewed; 1023 AA.
AC M7NSL3;
DT 29-MAY-2013, integrated into UniProtKB/TrEMBL.
DT 29-MAY-2013, sequence version 1.
DT 24-JAN-2024, entry version 37.
DE RecName: Full=type I site-specific deoxyribonuclease {ECO:0000256|ARBA:ARBA00012654};
DE EC=3.1.21.3 {ECO:0000256|ARBA:ARBA00012654};
GN Name=hsdR_1 {ECO:0000313|EMBL:EMR04680.1};
GN ORFNames=ADICEAN_00132 {ECO:0000313|EMBL:EMR04680.1};
OS Cesiribacter andamanensis AMV16.
OC Bacteria; Bacteroidota; Cytophagia; Cytophagales; Cesiribacteraceae;
OC Cesiribacter.
OX NCBI_TaxID=1279009 {ECO:0000313|EMBL:EMR04680.1, ECO:0000313|Proteomes:UP000011910};
RN [1] {ECO:0000313|EMBL:EMR04680.1, ECO:0000313|Proteomes:UP000011910}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AMV16 {ECO:0000313|EMBL:EMR04680.1,
RC ECO:0000313|Proteomes:UP000011910};
RX PubMed=23682146;
RA Shivaji S., Ara S., Begum Z., Srinivas T.N., Singh A., Kumar Pinnaka A.;
RT "Draft Genome Sequence of Cesiribacter andamanensis Strain AMV16T, Isolated
RT from a Soil Sample from a Mud Volcano in the Andaman Islands, India.";
RL Genome Announc. 1:E00240-13(2013).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=Endonucleolytic cleavage of DNA to give random double-stranded
CC fragments with terminal 5'-phosphates, ATP is simultaneously
CC hydrolyzed.; EC=3.1.21.3; Evidence={ECO:0000256|ARBA:ARBA00000851};
CC -!- SIMILARITY: Belongs to the HsdR family.
CC {ECO:0000256|ARBA:ARBA00008598}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EMR04680.1}.
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DR EMBL; AODQ01000002; EMR04680.1; -; Genomic_DNA.
DR AlphaFoldDB; M7NSL3; -.
DR STRING; 1279009.ADICEAN_00132; -.
DR REBASE; 65432; Can16ORF135P.
DR PATRIC; fig|1279009.4.peg.137; -.
DR eggNOG; COG0610; Bacteria.
DR Proteomes; UP000011910; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0009035; F:type I site-specific deoxyribonuclease activity; IEA:UniProtKB-EC.
DR GO; GO:0009307; P:DNA restriction-modification system; IEA:UniProtKB-KW.
DR CDD; cd22332; HsdR_N; 1.
DR Gene3D; 3.90.1570.50; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR007409; Restrct_endonuc_type1_HsdR_N.
DR InterPro; IPR040980; SWI2_SNF2.
DR PANTHER; PTHR42927; HELICASE SUPERFAMILY 1 AND 2 DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR42927:SF1; HELICASE SUPERFAMILY 1 AND 2 DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF04313; HSDR_N; 1.
DR Pfam; PF18766; SWI2_SNF2; 1.
DR SMART; SM00487; DEXDc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Endonuclease {ECO:0000256|ARBA:ARBA00022759};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801, ECO:0000313|EMBL:EMR04680.1};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000011910};
KW Restriction system {ECO:0000256|ARBA:ARBA00022747}.
FT DOMAIN 306..524
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
SQ SEQUENCE 1023 AA; 116867 MW; A59E1B9261C3EDBF CRC64;
MYGSMPLNHT PMKHKEIEFE KAIEHCLLQP ESGYELGNPA AYNAEKGLFP QDIITFIRKS
QPKRWAMLEQ FYGQQAGEAL ISDLEKELAA KGVLHVLRHG FKCFGKTFRL AYFTPNTRLN
PKAWEDYGKN RLTVTRQLHQ SPKFPMQSVD VVLALNGLPV VTLELKNPLT GQTVAHAKKQ
YRERDARDPL FRFKERALVH FAVDPDEVYM TTRLEGNSTF FLPFNRGFKN GAGNPPSNYD
NYRTAYLWEQ VLQKDSLLDI IARFLHLEVT EKEIAVPEGI KTIKKEILIF PRYHQLDVVR
SLVDSSREKG AGYNYLIQHS AGSGKSNSIA WLAHRLSSLH NEQDEKVFNT VIVITDRRVL
DQQLQNTIYQ FEHKEGVVQK IEENTQQLAK ALSDNTPIII TTIQKFPFIA QALETLAKKG
EGVKIETAGK RFAVIVDEAH SSQSGETATE LRKVLNKEGI QAAIASQMLE EEDEDLSEEA
RENMYQEMLK RPKQPNISFF AFTATPKYRT KLNFNEPGPD GKSPFHLYSM RQAIEEGFIM
DVLANYTTYK AYYGLIKKTE DDPEVPKKKA AKALARFMSL HPHNIRQKVE VIVEHFRLHT
RHKIGGSAKA MVVTGSRLHA VRYKRAFDEY IKEKAYTGIR SLVAFSGTVQ DPDIPNSAYT
EVGMNAGVKE SELPEKFATD AYQVLLVAEK YQTGFDQPLL HTMYVDKRLA GIQAVQTLSR
LNRTARGKED TFVLDFVNTH EDIYEAFKPY YEATAIDAEP DPHQLSKLQH TLDQWQVYTY
AEIVAFCEVW FSNKKDPSVS DHKKMNSILD KAVERFKEQS EAEQEEIKSQ MASFQRLYGF
ISQIVPYQDS ALEKLYTYLR FLLTKLPHRN QEQFQLVGEV ALKYYRLQQI SAGSIELGTG
EADPLKGPTE VGTGAPKDDK VNLSMLVDKL NDLFGTEFTK ADELFFDQVA ESAAAKDDII
ATVRANTFEN FMHYFMTALD GLIFERLDGN EELVKKTMNN PDMYRTAAQH LGRDVYNRVS
RRE
//