ID M8A586_TRIUA Unreviewed; 953 AA.
AC M8A586;
DT 29-MAY-2013, integrated into UniProtKB/TrEMBL.
DT 29-MAY-2013, sequence version 1.
DT 24-JAN-2024, entry version 54.
DE RecName: Full=Katanin p80 WD40 repeat-containing subunit B1 homolog {ECO:0000256|HAMAP-Rule:MF_03022};
GN ORFNames=TRIUR3_20031 {ECO:0000313|EMBL:EMS67191.1};
OS Triticum urartu (Red wild einkorn) (Crithodium urartu).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Pooideae; Triticodae; Triticeae; Triticinae; Triticum.
OX NCBI_TaxID=4572 {ECO:0000313|EMBL:EMS67191.1};
RN [1] {ECO:0000313|EMBL:EMS67191.1}
RP NUCLEOTIDE SEQUENCE.
RX PubMed=23535596; DOI=10.1038/nature11997;
RA Ling H.Q., Zhao S., Liu D., Wang J., Sun H., Zhang C., Fan H., Li D.,
RA Dong L., Tao Y., Gao C., Wu H., Li Y., Cui Y., Guo X., Zheng S., Wang B.,
RA Yu K., Liang Q., Yang W., Lou X., Chen J., Feng M., Jian J., Zhang X.,
RA Luo G., Jiang Y., Liu J., Wang Z., Sha Y., Zhang B., Wu H., Tang D.,
RA Shen Q., Xue P., Zou S., Wang X., Liu X., Wang F., Yang Y., An X., Dong Z.,
RA Zhang K., Zhang X., Luo M.C., Dvorak J., Tong Y., Wang J., Yang H., Li Z.,
RA Wang D., Zhang A., Wang J.;
RT "Draft genome of the wheat A-genome progenitor Triticum urartu.";
RL Nature 496:87-90(2013).
CC -!- FUNCTION: May participate in a complex which severs microtubules in an
CC ATP-dependent manner. Microtubule severing may promote rapid
CC reorganization of cellular microtubule arrays. {ECO:0000256|HAMAP-
CC Rule:MF_03022}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm, cytoskeleton {ECO:0000256|HAMAP-
CC Rule:MF_03022}.
CC -!- SIMILARITY: Belongs to the WD repeat KATNB1 family. {ECO:0000256|HAMAP-
CC Rule:MF_03022}.
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DR EMBL; KD022071; EMS67191.1; -; Genomic_DNA.
DR AlphaFoldDB; M8A586; -.
DR STRING; 4572.M8A586; -.
DR eggNOG; KOG0267; Eukaryota.
DR OMA; IMGQHDQ; -.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-UniRule.
DR GO; GO:0008352; C:katanin complex; IEA:InterPro.
DR GO; GO:0005874; C:microtubule; IEA:UniProtKB-KW.
DR GO; GO:0008017; F:microtubule binding; IEA:UniProtKB-UniRule.
DR GO; GO:0051013; P:microtubule severing; IEA:UniProtKB-UniRule.
DR CDD; cd00200; WD40; 1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 2.
DR HAMAP; MF_03022; Katanin_p80_B1; 1.
DR InterPro; IPR020472; G-protein_beta_WD-40_rep.
DR InterPro; IPR028021; Katanin_C-terminal.
DR InterPro; IPR026962; KTNB1.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR PANTHER; PTHR19845; KATANIN P80 SUBUNIT; 1.
DR PANTHER; PTHR19845:SF0; KATANIN P80 WD40 REPEAT-CONTAINING SUBUNIT B1; 1.
DR Pfam; PF13925; Katanin_con80; 1.
DR Pfam; PF00400; WD40; 5.
DR PRINTS; PR00320; GPROTEINBRPT.
DR SMART; SM00320; WD40; 5.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
DR PROSITE; PS00678; WD_REPEATS_1; 2.
DR PROSITE; PS50082; WD_REPEATS_2; 5.
DR PROSITE; PS50294; WD_REPEATS_REGION; 4.
PE 3: Inferred from homology;
KW Cytoplasm {ECO:0000256|HAMAP-Rule:MF_03022};
KW Cytoskeleton {ECO:0000256|HAMAP-Rule:MF_03022};
KW Microtubule {ECO:0000256|HAMAP-Rule:MF_03022}.
FT DOMAIN 789..923
FT /note="Katanin p80 subunit C-terminal"
FT /evidence="ECO:0000259|Pfam:PF13925"
SQ SEQUENCE 953 AA; 103945 MW; 51149AD1FE04E53C CRC64;
MTTNTKRAYK LRILDSVQIF FLPRGSFSNC LFGEEEFVAH ASNVNCLKIG RKTSRVLVTG
GEDHKVNLWA IGKPNSISSL PGHTSAVESV AFDSTEVFVA AGAASGTVKL WDLEEAKIVR
TLTGHRSNCM SVDFHPFGEF FASGSLDTNL KIWDIRRKGC IHTYKGHTRG VNAIRFTPDG
RWVVSGGEDS AVKIWDLTAG KLLHEFKSHE GQIQCIDFHP HEFLLATGSA DKTVKFWDLE
TFELIGSTGP EMTGVRSMTF NPDGRSLLCG LHESLKVALL FPHVTVTADF SFPCLSESCV
GIWVVDLTLT DNQTINWQRL EPHATSTSAL LNGRSELKTS SGGTMPLQND SGSRANIGRS
SALQNSENNL KASTGRLSVS QNSDSAPKEI KPTALFETQH MSNLYFVCSC YDNEASGLVP
STPQRVGTGS STRTAGNSTY ASGGTTLKRS SLKSNSTSNL HNFSKTDVVP AAVIIPRTSS
GAELGTGSRS YAADVAPVLS KASRRAEPAT DPRTESADVA PAVVPRTSSR MEMASDSAPD
AVSRVGRRLE SAADSRKESA DAAPVVPRAT SRMEMASDSV PVLPKAGRRF ESATDSRKES
TDEAPVVVPR ATSRMEMASD SRREPSAGRV SPFRIQSRYA EPRKSTNVKV DMDKVDVGSK
DTESDDLTCQ IFLPRRNGAV QTVIPEETRE DVKHGSVYRS GFSDVPRMRK PRDNCYIEVS
RAVFLGRTRS IVSNWEGRDQ SPSHEEPTTS NSALGAPRGR IYSSRGSSQA AETNIVTSEE
DVLSVLIEEH DLFLSSTRSR LTKLQILHQM WQRNDIRGVF SALEKMSDHA VSTLQPLFPV
LHGITVALLI HNYKISANSR HVAVSLELVV KLVRTFGPVI HSTVSVGPSS VGVDLEAEQR
RERCNLCFIE LEKVKNKLPS LMSMIYITGH RLLAVPPTVG IGVLDQHYSE LNS
//
