GenomeNet

Database: UniProt
Entry: M9PBC0_DROME
LinkDB: M9PBC0_DROME
Original site: M9PBC0_DROME 
ID   M9PBC0_DROME            Unreviewed;      2023 AA.
AC   M9PBC0;
DT   26-JUN-2013, integrated into UniProtKB/TrEMBL.
DT   26-JUN-2013, sequence version 1.
DT   27-SEP-2017, entry version 37.
DE   RecName: Full=Voltage-dependent L-type calcium channel subunit alpha {ECO:0000256|RuleBase:RU003808};
GN   Name=Ca-alpha1D {ECO:0000313|EMBL:AGB93018.1,
GN   ECO:0000313|FlyBase:FBgn0001991};
GN   Synonyms=alpha1 {ECO:0000313|EMBL:AGB93018.1}, alpha1D
GN   {ECO:0000313|EMBL:AGB93018.1}, BG:DS02795.1
GN   {ECO:0000313|EMBL:AGB93018.1}, Ca-_1D {ECO:0000313|EMBL:AGB93018.1},
GN   Ca-a1D {ECO:0000313|EMBL:AGB93018.1}, Ca-alpha1
GN   {ECO:0000313|EMBL:AGB93018.1}, ca-alpha1D
GN   {ECO:0000313|EMBL:AGB93018.1}, ca-alpha1d
GN   {ECO:0000313|EMBL:AGB93018.1}, Ca-alpha[[1]]D
GN   {ECO:0000313|EMBL:AGB93018.1}, Ca_alpha1D
GN   {ECO:0000313|EMBL:AGB93018.1}, Caalpha1D
GN   {ECO:0000313|EMBL:AGB93018.1}, cad {ECO:0000313|EMBL:AGB93018.1}, caID
GN   {ECO:0000313|EMBL:AGB93018.1}, DmCa1alpha1
GN   {ECO:0000313|EMBL:AGB93018.1}, DmCa1D {ECO:0000313|EMBL:AGB93018.1},
GN   Dmca1D {ECO:0000313|EMBL:AGB93018.1}, Dmel\CG4894
GN   {ECO:0000313|EMBL:AGB93018.1}, DroCa1 {ECO:0000313|EMBL:AGB93018.1},
GN   l(2)35Fa {ECO:0000313|EMBL:AGB93018.1}, l35Fa
GN   {ECO:0000313|EMBL:AGB93018.1};
GN   ORFNames=CG4894 {ECO:0000313|EMBL:AGB93018.1,
GN   ECO:0000313|FlyBase:FBgn0001991}, Dmel_CG4894
GN   {ECO:0000313|EMBL:AGB93018.1};
OS   Drosophila melanogaster (Fruit fly).
OC   Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
OC   Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha;
OC   Ephydroidea; Drosophilidae; Drosophila; Sophophora.
OX   NCBI_TaxID=7227 {ECO:0000313|EMBL:AGB93018.1, ECO:0000313|Proteomes:UP000000803};
RN   [1] {ECO:0000313|EMBL:AGB93018.1, ECO:0000313|Proteomes:UP000000803}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
RX   PubMed=10731132; DOI=10.1126/science.287.5461.2185;
RA   Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D.,
RA   Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F.,
RA   George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N.,
RA   Sutton G.G., Wortman J.R., Yandell M.D., Zhang Q., Chen L.X.,
RA   Brandon R.C., Rogers Y.H., Blazej R.G., Champe M., Pfeiffer B.D.,
RA   Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Gabor G.L.,
RA   Abril J.F., Agbayani A., An H.J., Andrews-Pfannkoch C., Baldwin D.,
RA   Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M.,
RA   Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S.,
RA   Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P.,
RA   Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I.,
RA   Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P.,
RA   de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M.,
RA   Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P.,
RA   Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W.,
RA   Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K.,
RA   Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M.,
RA   Harris N.L., Harvey D., Heiman T.J., Hernandez J.R., Houck J.,
RA   Hostin D., Houston K.A., Howland T.J., Wei M.H., Ibegwam C.,
RA   Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A.,
RA   Kimmel B.E., Kodira C.D., Kraft C., Kravitz S., Kulp D., Lai Z.,
RA   Lasko P., Lei Y., Levitsky A.A., Li J., Li Z., Liang Y., Lin X.,
RA   Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D.,
RA   Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A.,
RA   Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L.,
RA   Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M.,
RA   Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G.,
RA   Reinert K., Remington K., Saunders R.D., Scheeler F., Shen H.,
RA   Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T.,
RA   Spier E., Spradling A.C., Stapleton M., Strong R., Sun E.,
RA   Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X.,
RA   Wang Z.Y., Wassarman D.A., Weinstock G.M., Weissenbach J.,
RA   Williams S.M., WoodageT, Worley K.C., Wu D., Yang S., Yao Q.A., Ye J.,
RA   Yeh R.F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L.,
RA   Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S., Zhu X., Smith H.O.,
RA   Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.;
RT   "The genome sequence of Drosophila melanogaster.";
RL   Science 287:2185-2195(2000).
RN   [2] {ECO:0000313|EMBL:AGB93018.1, ECO:0000313|Proteomes:UP000000803}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
RX   PubMed=12537568;
RA   Celniker S.E., Wheeler D.A., Kronmiller B., Carlson J.W., Halpern A.,
RA   Patel S., Adams M., Champe M., Dugan S.P., Frise E., Hodgson A.,
RA   George R.A., Hoskins R.A., Laverty T., Muzny D.M., Nelson C.R.,
RA   Pacleb J.M., Park S., Pfeiffer B.D., Richards S., Sodergren E.J.,
RA   Svirskas R., Tabor P.E., Wan K., Stapleton M., Sutton G.G., Venter C.,
RA   Weinstock G., Scherer S.E., Myers E.W., Gibbs R.A., Rubin G.M.;
RT   "Finishing a whole-genome shotgun: release 3 of the Drosophila
RT   melanogaster euchromatic genome sequence.";
RL   Genome Biol. 3:RESEARCH0079-RESEARCH0079(2002).
RN   [3] {ECO:0000313|EMBL:AGB93018.1, ECO:0000313|Proteomes:UP000000803}
RP   GENOME REANNOTATION.
RC   STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
RX   PubMed=12537572; DOI=10.1186/gb-2002-3-12-research0083;
RA   Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S.,
RA   Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E.,
RA   Smith C.D., Tupy J.L., Whitfied E.J., Bayraktaroglu L., Berman B.P.,
RA   Bettencourt B.R., Celniker S.E., de Grey A.D., Drysdale R.A.,
RA   Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q.,
RA   Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M.,
RA   Lewis S.E.;
RT   "Annotation of the Drosophila melanogaster euchromatic genome: a
RT   systematic review.";
RL   Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002).
RN   [4] {ECO:0000313|EMBL:AGB93018.1, ECO:0000313|Proteomes:UP000000803}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
RX   PubMed=12537573;
RA   Kaminker J.S., Bergman C.M., Kronmiller B., Carlson J., Svirskas R.,
RA   Patel S., Frise E., Wheeler D.A., Lewis S.E., Rubin G.M.,
RA   Ashburner M., Celniker S.E.;
RT   "The transposable elements of the Drosophila melanogaster euchromatin:
RT   a genomics perspective.";
RL   Genome Biol. 3:RESEARCH0084-RESEARCH0084(2002).
RN   [5] {ECO:0000313|EMBL:AGB93018.1, ECO:0000313|Proteomes:UP000000803}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
RX   PubMed=12537574;
RA   Hoskins R.A., Smith C.D., Carlson J.W., Carvalho A.B., Halpern A.,
RA   Kaminker J.S., Kennedy C., Mungall C.J., Sullivan B.A., Sutton G.G.,
RA   Yasuhara J.C., Wakimoto B.T., Myers E.W., Celniker S.E., Rubin G.M.,
RA   Karpen G.H.;
RT   "Heterochromatic sequences in a Drosophila whole-genome shotgun
RT   assembly.";
RL   Genome Biol. 3:RESEARCH0085-RESEARCH0085(2002).
RN   [6] {ECO:0000313|EMBL:AGB93018.1, ECO:0000313|Proteomes:UP000000803}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
RX   PubMed=16110336; DOI=10.1371/journal.pcbi.0010022;
RA   Quesneville H., Bergman C.M., Andrieu O., Autard D., Nouaud D.,
RA   Ashburner M., Anxolabehere D.;
RT   "Combined evidence annotation of transposable elements in genome
RT   sequences.";
RL   PLoS Comput. Biol. 1:166-175(2005).
RN   [7] {ECO:0000313|EMBL:AGB93018.1, ECO:0000313|Proteomes:UP000000803}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
RX   PubMed=17569856; DOI=10.1126/science.1139815;
RA   Smith C.D., Shu S., Mungall C.J., Karpen G.H.;
RT   "The Release 5.1 annotation of Drosophila melanogaster
RT   heterochromatin.";
RL   Science 316:1586-1591(2007).
RN   [8] {ECO:0000313|EMBL:AGB93018.1, ECO:0000313|Proteomes:UP000000803}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
RX   PubMed=17569867; DOI=10.1126/science.1139816;
RA   Hoskins R.A., Carlson J.W., Kennedy C., Acevedo D., Evans-Holm M.,
RA   Frise E., Wan K.H., Park S., Mendez-Lago M., Rossi F., Villasante A.,
RA   Dimitri P., Karpen G.H., Celniker S.E.;
RT   "Sequence finishing and mapping of Drosophila melanogaster
RT   heterochromatin.";
RL   Science 316:1625-1628(2007).
CC   -!- FUNCTION: Voltage-sensitive calcium channels (VSCC) mediate the
CC       entry of calcium ions into excitable cells and are also involved
CC       in a variety of calcium-dependent processes, including muscle
CC       contraction, hormone or neurotransmitter release, gene expression,
CC       cell motility, cell division and cell death. The isoform alpha-1C
CC       gives rise to L-type calcium currents. Long-lasting (L-type)
CC       calcium channels belong to the 'high-voltage activated' (HVA)
CC       group. They are blocked by dihydropyridines (DHP),
CC       phenylalkylamines, benzothiazepines, and by omega-agatoxin-IIIA
CC       (omega-Aga-IIIA). They are however insensitive to omega-conotoxin-
CC       GVIA (omega-CTx-GVIA) and omega-agatoxin-IVA (omega-Aga-IVA).
CC       Calcium channels containing the alpha-1C subunit play an important
CC       role in excitation-contraction coupling in the heart. Binding of
CC       calmodulin or CABP1 at the same regulatory sites results in an
CC       opposit effects on the channel function.
CC       {ECO:0000256|RuleBase:RU003808}.
CC   -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|RuleBase:RU003808};
CC       Multi-pass membrane protein {ECO:0000256|RuleBase:RU003808}.
CC   -!- SIMILARITY: Belongs to the calcium channel alpha-1 subunit
CC       (TC 1.A.1.11) family. {ECO:0000256|RuleBase:RU003808}.
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DR   EMBL; AE014134; AGB93018.1; -; Genomic_DNA.
DR   RefSeq; NP_001260483.1; NM_001273554.1.
DR   UniGene; Dm.4099; -.
DR   ProteinModelPortal; M9PBC0; -.
DR   SMR; M9PBC0; -.
DR   PaxDb; M9PBC0; -.
DR   PRIDE; M9PBC0; -.
DR   EnsemblMetazoa; FBtr0332023; FBpp0304339; FBgn0001991.
DR   GeneID; 34950; -.
DR   CTD; 34950; -.
DR   FlyBase; FBgn0001991; Ca-alpha1D.
DR   eggNOG; KOG2301; Eukaryota.
DR   eggNOG; ENOG410XNP6; LUCA.
DR   GeneTree; ENSGT00830000128247; -.
DR   OrthoDB; EOG091G0TKO; -.
DR   ChiTaRS; Ca-alpha1D; fly.
DR   GenomeRNAi; 34950; -.
DR   Proteomes; UP000000803; Chromosome 2L.
DR   Bgee; FBgn0001991; -.
DR   ExpressionAtlas; M9PBC0; differential.
DR   GO; GO:0005891; C:voltage-gated calcium channel complex; IEA:InterPro.
DR   GO; GO:0005245; F:voltage-gated calcium channel activity; IEA:InterPro.
DR   InterPro; IPR031688; CAC1F_C.
DR   InterPro; IPR031649; GPHH_dom.
DR   InterPro; IPR005821; Ion_trans_dom.
DR   InterPro; IPR014873; VDCC_a1su_IQ.
DR   InterPro; IPR005446; VDCC_L_a1su.
DR   InterPro; IPR002077; VDCCAlpha1.
DR   Pfam; PF08763; Ca_chan_IQ; 1.
DR   Pfam; PF16885; CAC1F_C; 1.
DR   Pfam; PF16905; GPHH; 1.
DR   Pfam; PF00520; Ion_trans; 4.
DR   PRINTS; PR00167; CACHANNEL.
DR   PRINTS; PR01630; LVDCCALPHA1.
DR   SMART; SM01062; Ca_chan_IQ; 1.
PE   3: Inferred from homology;
KW   Calcium {ECO:0000256|RuleBase:RU003808};
KW   Calcium channel {ECO:0000256|RuleBase:RU003808};
KW   Calcium transport {ECO:0000256|RuleBase:RU003808};
KW   Complete proteome {ECO:0000313|Proteomes:UP000000803};
KW   Ion channel {ECO:0000256|RuleBase:RU003808};
KW   Ion transport {ECO:0000256|RuleBase:RU003808};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000803};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius};
KW   Transport {ECO:0000256|RuleBase:RU003808};
KW   Voltage-gated channel {ECO:0000256|RuleBase:RU003808}.
FT   TRANSMEM    124    142       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    162    183       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    195    214       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    255    277       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    329    350       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    362    384       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    493    511       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    523    541       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    616    636       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    694    722       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    853    870       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    890    910       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    922    948       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    968    997       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM   1097   1120       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM   1174   1192       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM   1204   1222       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM   1234   1251       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM   1319   1337       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM   1409   1433       Helical. {ECO:0000256|SAM:Phobius}.
FT   DOMAIN     1568   1602       Ca_chan_IQ. {ECO:0000259|SMART:SM01062}.
SQ   SEQUENCE   2023 AA;  224577 MW;  185185E477309CF4 CRC64;
     MDFERGASGE GGFSPNGNGG PGSGDVSRTA RYDSGEGDLG GGNNIMGIDS MGIANIPETM
     NGTTIGPSGA GGQKGGAAAG AAGQKRQQRR GKPQPDRPQR ALFCLSVKNP LRALCIRIVE
     WKPFEFLILL TIFANCIALA VYTPYPGSDS NVTNQTLEKV EYVFLVIFTA ECVMKILAYG
     FVLHNGAYLR NGWNLLDFTI VVIGAISTAL SQLMKDAFDV KALRAFRVLR PLRLVSGVPS
     LQVVLNSILK AMVPLFHIAL LVLFVIIIYA IIGLELFSGK LHKACRDEIT GEYEENIRPC
     GVGYQCPPGY KCYGGWDGPN DGITNFDNFG LAMLTVFQCV TLEGWTDVLY SIQDAMGSDW
     QWMYFISMVI LGAFFVMNLI LGVLSGEFSK ERNKAKNRGD FQKLREKQQI EEDLRGYLDW
     ITQAEDIEPD AVGGLISDGK GKQPNEMDST ENLGEEMPEV QMTESRWRKM KKDFDRVNRR
     MRRACRKAVK SQAFYWLIIV LVFLNTGVLA TEHYGQLDWL DNFQEYTNVF FIGLFTCEML
     LKMYSLGFQG YFVSLFNRFD CFVVIGSITE TLLTNTGMMP PLGVSVLRCV RLLRVFKVTK
     YWRSLSNLVA SLLNSIQSIA SLLLLLFLFI VIFALLGMQV FGGKFNFDGK EEKYRMNFDC
     FWQALLTVFQ IMTGEDWNAV MYVGINAYGG VSSYGALACI YFIILFICGN YILLNVFLAI
     AVDNLADADS LSEVEKEEEP HDESAQKKSH SPTPTIDGMD DHLSIDIDME QQELDDEDKM
     DHETLSDEEV REMCEEEEEV DEEGMITARP RRMSEVNTAT KILPIPPGTS FFLFSQTNRF
     RVFCHWLCNH SNFGNIILCC IMFSSAMLAA ENPLRANDDL NKVLNKFDYF FTAVFTIELI
     LKLISYGFVL HDGAFCRSAF NLLDLLVVCV SLISLVSSSN AISVVKILRV LRVLRPLRAI
     NRAKGLKYVV KCVVVAIKTI GNIMLVTYLL QFMFAVIGVQ LFKGKFFKCT DGSKMTQDEC
     YGTYLVYDDG DVHKPRLRER EWSNNRFHFD DVAKGMLTLF TVSTFEGWPG LLYVSIDSNK
     ENGGPIHNFR PIVAAYYIIY IIIIAFFMVN IFVGFVIVTF QNEGEQEYKN CDLDKNQRNC
     IEFALKAKPV RRYIPKHGIQ YKVWWFVTSS SFEYTIFILI MINTVTLAMK FYNQPLWYTE
     LLDALNMIFT AVFALEFVFK LAAFRFKNYF GDAWNVFDFI IVLGSFIDIV YSEIKSKDTS
     QIAECDIVEG CKSTKKSAGS NLISINFFRL FRVMRLVKLL SKGEGIRTLL WTFIKSFQAL
     PYVALLIVLL FFIYAVVGMQ VFGKIALDGG NAITANNNFQ TFQQAVLVLF RSATGEAWQE
     IMMSCSAQPD VKCDMNSDTP GEPCGSSIAY PYFISFYVLC SFLIINLFVA VIMDNFDYLT
     RDWSILGPHH LDEFIRLWSE YDPDAKGRIK HLDVVTLLRK ISPPLGFGKL CPHRMACKRL
     VSMNMPLNSD GTVLFNATLF AVVRTSLSIK TDGNIDDANS ELRATIKQIW KRTNPKLLDQ
     VVPPPGNDDE VTVGKFYATY LIQDYFRRFK KRKEQEGKEG HPDSNTVTLQ AGLRTLHEVS
     PALKRAISGN LDELDQEPEP MHRRHHTLFG SVWSSIRRHG NGTFRRSAKA TASQSNGALA
     IGGSASAALG VGGSSLVLGS SDPAGGDYLY DTLNRSVADG VNNITRNIMQ ARLAAAGKLQ
     DELQGAGSGG ELRTFGESIS MRPLAKNGGG AATVAGTLPP EANAINYDNR NRGILLHPYN
     NVYAPNGALP GHERMIQSTP ASPYDQRRLP TSSDMNGLAE SLIGGVLAAE GLGKYCDSEF
     VGTAAREMRE ALDMTPEEMN LAAHQILSNE HSLSLIGSSN GSIFGGSAGG LGGAGSGGVG
     GLGGSSSIRN AFGGSGSGPS SLSPQHQPYS GTLNSPPIPD NRLRRVATVT TTNNNNKSQV
     SQNNSNSLNV RANANSQMNM SPTGQPVQQQ SPLRGQGNQT YSS
//
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