ID M9WHD8_9PSED Unreviewed; 233 AA.
AC M9WHD8;
DT 26-JUN-2013, integrated into UniProtKB/TrEMBL.
DT 26-JUN-2013, sequence version 1.
DT 03-MAY-2023, entry version 23.
DE SubName: Full=RNA polymerase sigma 70 {ECO:0000313|EMBL:AGJ92712.1};
DE Flags: Fragment;
GN Name=rpoD {ECO:0000313|EMBL:AGJ92712.1};
OS Pseudomonas sp. S36409.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
OC Pseudomonadaceae; Pseudomonas.
OX NCBI_TaxID=1323632 {ECO:0000313|EMBL:AGJ92712.1};
RN [1] {ECO:0000313|EMBL:AGJ92712.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=S36409 {ECO:0000313|EMBL:AGJ92712.1};
RX PubMed=23584779;
RA Parejko J.A., Mavrodi D.V., Mavrodi O.V., Weller D.M., Thomashow L.S.;
RT "Taxonomy and Distribution of Phenazine-Producing Pseudomonas spp. in the
RT Dryland Agroecosystem of the Inland Pacific Northwest, United States.";
RL Appl. Environ. Microbiol. 79:3887-3891(2013).
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DR EMBL; KC834275; AGJ92712.1; -; Genomic_DNA.
DR AlphaFoldDB; M9WHD8; -.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0016987; F:sigma factor activity; IEA:InterPro.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR Gene3D; 1.10.601.10; RNA Polymerase Primary Sigma Factor; 1.
DR InterPro; IPR007631; RNA_pol_sigma_70_non-ess.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR Pfam; PF04546; Sigma70_ner; 1.
DR SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
PE 4: Predicted;
FT DOMAIN 13..225
FT /note="RNA polymerase sigma factor 70 non-essential"
FT /evidence="ECO:0000259|Pfam:PF04546"
FT REGION 39..91
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 69..88
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:AGJ92712.1"
FT NON_TER 233
FT /evidence="ECO:0000313|EMBL:AGJ92712.1"
SQ SEQUENCE 233 AA; 25493 MW; AAE679099E1C039A CRC64;
EGIREVMGAI AHFPGTVDHI LSEYTRVTTE GGRLSDVLSG YIDPDDGIAP PAAEVPPPVD
PKAPKADDDS DDEEAEASSD DEEEVESGPD PIIAAQRFGA VSDQMEITRK ALKKHGRANK
QAIAELLALA ELFMPIKLVP KQFEGLVERV RSALERLRAQ ERAIMQLCVR DARMPRTDFL
RQFPGHEVDE AWSDALAKGK AKYAEAIGRL QPDIIRCQQK LSALEAETGL TIA
//