ID N1MQR8_9SPHN Unreviewed; 338 AA.
AC N1MQR8;
DT 26-JUN-2013, integrated into UniProtKB/TrEMBL.
DT 26-JUN-2013, sequence version 1.
DT 24-JAN-2024, entry version 33.
DE SubName: Full=Mobile element protein {ECO:0000313|EMBL:CCW19084.1};
GN ORFNames=EBBID32_34460 {ECO:0000313|EMBL:CCW19084.1};
OS Sphingobium indicum BiD32.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC Sphingomonadaceae; Sphingobium.
OX NCBI_TaxID=1301087 {ECO:0000313|EMBL:CCW19084.1, ECO:0000313|Proteomes:UP000013201};
RN [1] {ECO:0000313|EMBL:CCW19084.1, ECO:0000313|Proteomes:UP000013201}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BiD32 {ECO:0000313|EMBL:CCW19084.1,
RC ECO:0000313|Proteomes:UP000013201};
RA Le V.;
RL Submitted (MAR-2013) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:CCW19084.1, ECO:0000313|Proteomes:UP000013201}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BiD32 {ECO:0000313|EMBL:CCW19084.1,
RC ECO:0000313|Proteomes:UP000013201};
RA Nielsen J.L., Zhou N.A., Kjeldal H.;
RT "Bisphenol A degrading Sphingobium sp. strain BiD32.";
RL Submitted (APR-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the transposase IS21/IS408/IS1162 family.
CC {ECO:0000256|ARBA:ARBA00009277}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CCW19084.1}.
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DR EMBL; CAVK010000170; CCW19084.1; -; Genomic_DNA.
DR RefSeq; WP_006961684.1; NZ_CAVK010000170.1.
DR AlphaFoldDB; N1MQR8; -.
DR OrthoDB; 2065409at2; -.
DR Proteomes; UP000013201; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR017894; HTH_IS21_transposase_type.
DR InterPro; IPR001584; Integrase_cat-core.
DR InterPro; IPR025246; IS30-like_HTH.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR NCBIfam; NF033546; transpos_IS21; 1.
DR PANTHER; PTHR35004; TRANSPOSASE RV3428C-RELATED; 1.
DR PANTHER; PTHR35004:SF6; TRANSPOSASE RV3428C-RELATED; 1.
DR Pfam; PF13936; HTH_38; 1.
DR Pfam; PF00665; rve; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50531; HTH_IS21; 1.
DR PROSITE; PS50994; INTEGRASE; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000013201}.
FT DOMAIN 5..67
FT /note="HTH IS21-type"
FT /evidence="ECO:0000259|PROSITE:PS50531"
FT DOMAIN 115..295
FT /note="Integrase catalytic"
FT /evidence="ECO:0000259|PROSITE:PS50994"
SQ SEQUENCE 338 AA; 38283 MW; FD57B03333155C95 CRC64;
MVGDEIAMEI RVLAKHGKGV REIAREIGCS RNTVRRYLRE PSAERYRQRP GRSTKLASYQ
DYIAGRVRAA LPEAIPAKVL LGEIRERGYS GGYTMVKAYV ASLRTMIVPE PVVRFETAPG
QQMQVDWAVI RRGPKRLSLF VATLGWSRAS YLEFVDDERV ETLIACHEHA FLAFGGVPRD
VRFDNMKTVV LERDAYGDGR HRFNPAFLDY ARHAGFRPRL CSPYRPQTKG KVERFIRYVR
GSFWVPLVSR LRQDGLEVDR ETANVAVWRW LREVANARVH ATTGAVPQER LEIERAKLSQ
LPPLYPGQSV RAAVAPPRPI VGIQHPLAMY DSFAGVAA
//
