ID N2IMQ5_9PSED Unreviewed; 753 AA.
AC N2IMQ5;
DT 26-JUN-2013, integrated into UniProtKB/TrEMBL.
DT 26-JUN-2013, sequence version 1.
DT 24-JAN-2024, entry version 38.
DE SubName: Full=Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:ENA28682.1};
GN ORFNames=HMPREF1487_08671 {ECO:0000313|EMBL:ENA28682.1};
OS Pseudomonas sp. HPB0071.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
OC Pseudomonadaceae; Pseudomonas.
OX NCBI_TaxID=1203578 {ECO:0000313|EMBL:ENA28682.1, ECO:0000313|Proteomes:UP000017050};
RN [1] {ECO:0000313|EMBL:ENA28682.1, ECO:0000313|Proteomes:UP000017050}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=HPB0071 {ECO:0000313|EMBL:ENA28682.1,
RC ECO:0000313|Proteomes:UP000017050};
RG The Broad Institute Genome Sequencing Platform;
RA Earl A., Ward D., Feldgarden M., Gevers D., Schmidt T., Dover J., Dai D.,
RA Walker B., Young S.K., Zeng Q., Gargeya S., Fitzgerald M., Haas B.,
RA Abouelleil A., Alvarado L., Arachchi H.M., Berlin A.M., Chapman S.B.,
RA Dewar J., Goldberg J., Griggs A., Gujja S., Hansen M., Howarth C.,
RA Imamovic A., Larimer J., McCowan C., Murphy C., Neiman D., Pearson M.,
RA Priest M., Roberts A., Saif S., Shea T., Sisk P., Sykes S., Wortman J.,
RA Nusbaum C., Birren B.;
RT "The Genome Sequence of Pseudomonas sp. HPB0071.";
RL Submitted (MAR-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-
CC pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ENA28682.1}.
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DR EMBL; AQFP01000016; ENA28682.1; -; Genomic_DNA.
DR RefSeq; WP_010798827.1; NZ_KI517368.1.
DR AlphaFoldDB; N2IMQ5; -.
DR PATRIC; fig|1203578.3.peg.4395; -.
DR HOGENOM; CLU_000445_70_20_6; -.
DR OrthoDB; 9804951at2; -.
DR Proteomes; UP000017050; Unassembled WGS sequence.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-KW.
DR GO; GO:0000155; F:phosphorelay sensor kinase activity; IEA:InterPro.
DR GO; GO:0071555; P:cell wall organization; IEA:InterPro.
DR CDD; cd01948; EAL; 1.
DR CDD; cd01949; GGDEF; 1.
DR CDD; cd00130; PAS; 1.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 3.20.20.450; EAL domain; 1.
DR Gene3D; 3.30.450.20; PAS domain; 1.
DR InterPro; IPR001633; EAL_dom.
DR InterPro; IPR035919; EAL_sf.
DR InterPro; IPR000160; GGDEF_dom.
DR InterPro; IPR029787; Nucleotide_cyclase.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR013656; PAS_4.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR InterPro; IPR011620; Sig_transdc_His_kinase_LytS_TM.
DR NCBIfam; TIGR00254; GGDEF; 1.
DR NCBIfam; TIGR00229; sensory_box; 1.
DR PANTHER; PTHR44757:SF2; CYCLIC DI-GMP PHOSPHODIESTERASE PDER; 1.
DR PANTHER; PTHR44757; DIGUANYLATE CYCLASE DGCP; 1.
DR Pfam; PF07694; 5TM-5TMR_LYT; 1.
DR Pfam; PF00563; EAL; 1.
DR Pfam; PF00990; GGDEF; 1.
DR Pfam; PF08448; PAS_4; 1.
DR SMART; SM00052; EAL; 1.
DR SMART; SM00267; GGDEF; 1.
DR SUPFAM; SSF141868; EAL domain-like; 1.
DR SUPFAM; SSF55073; Nucleotide cyclase; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR PROSITE; PS50883; EAL; 1.
DR PROSITE; PS50887; GGDEF; 1.
PE 4: Predicted;
KW Cell membrane {ECO:0000256|ARBA:ARBA00022475};
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000017050};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW ECO:0000256|SAM:Phobius}.
FT TRANSMEM 34..53
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 65..93
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 99..120
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 132..154
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 353..490
FT /note="GGDEF"
FT /evidence="ECO:0000259|PROSITE:PS50887"
FT DOMAIN 499..752
FT /note="EAL"
FT /evidence="ECO:0000259|PROSITE:PS50883"
FT COILED 179..206
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 753 AA; 83219 MW; 33A133979C7E40E4 CRC64;
MFVDFLSNAA LLLALCWLRD YLWRTWPHKV LSSELIVGCA TGLICIAVMI HPVPIGLGIF
VDARLAILSV TALMAGPLVA SIAAAMTALY RFWLGGVGAY PGVLNAFMAV ALGLAYRMAY
HRGWIRQGPL QVLLLGGAVH ALALLALTLV YGPFGQAAQR TMLAMMLTMP PTGLLVWLLF
RDQEKRNQAE QALARSEARL SAITQAIPDI LLVIDQDGRF QEVVSSSHDA KKINEHLAKV
GQRLQDVLPY TQANYLTTWV RKVLKSPTPL TVEYQLSSPA GERYFEGKAQ AIASDAEHKQ
AIVIVTRDVT ARHEYEEQIR RLAFYDTLTE LPNRRFFLER LKTAQLACQR HGHSGALLFI
DLDNFKNIND LYGHDAGDTV LKEAAHRLKQ IVRATDTVAR LGGDEFVILL EGLSEDEQAA
AHQASHIGQQ VLAALERPFE FEQGNQTISG SVGIVLFDSR SASHDLLQQA DISMYSAKSH
GKNAIRFYDP SMQSSIAARL QLEQQIRQGL LDNEFRVYYQ LQWSDQKGLI GLEALLRWQH
PDWGLVGPAA FLEVASNTGL LTELDRWLLD EVCSQLLAWS KEPSLAHLPV SVNVCASHLR
QSSFATEVMD VLKHKHIDPA LIKIELTEAT LILDLDQACS HIETLRGQGV RFALDDFGTG
YSSLNYLQKL PIDQVKIDQS FVQRLPGSES VAIIQAISGL ATTFGLDIVA EGVESEAQRQ
LLAENGCTTY QGYLFAKPLP ARDVVRAAEL AST
//