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Database: UniProt
Entry: N2IMQ5_9PSED
LinkDB: N2IMQ5_9PSED
Original site: N2IMQ5_9PSED 
ID   N2IMQ5_9PSED            Unreviewed;       753 AA.
AC   N2IMQ5;
DT   26-JUN-2013, integrated into UniProtKB/TrEMBL.
DT   26-JUN-2013, sequence version 1.
DT   24-JAN-2024, entry version 38.
DE   SubName: Full=Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:ENA28682.1};
GN   ORFNames=HMPREF1487_08671 {ECO:0000313|EMBL:ENA28682.1};
OS   Pseudomonas sp. HPB0071.
OC   Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
OC   Pseudomonadaceae; Pseudomonas.
OX   NCBI_TaxID=1203578 {ECO:0000313|EMBL:ENA28682.1, ECO:0000313|Proteomes:UP000017050};
RN   [1] {ECO:0000313|EMBL:ENA28682.1, ECO:0000313|Proteomes:UP000017050}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=HPB0071 {ECO:0000313|EMBL:ENA28682.1,
RC   ECO:0000313|Proteomes:UP000017050};
RG   The Broad Institute Genome Sequencing Platform;
RA   Earl A., Ward D., Feldgarden M., Gevers D., Schmidt T., Dover J., Dai D.,
RA   Walker B., Young S.K., Zeng Q., Gargeya S., Fitzgerald M., Haas B.,
RA   Abouelleil A., Alvarado L., Arachchi H.M., Berlin A.M., Chapman S.B.,
RA   Dewar J., Goldberg J., Griggs A., Gujja S., Hansen M., Howarth C.,
RA   Imamovic A., Larimer J., McCowan C., Murphy C., Neiman D., Pearson M.,
RA   Priest M., Roberts A., Saif S., Shea T., Sisk P., Sykes S., Wortman J.,
RA   Nusbaum C., Birren B.;
RT   "The Genome Sequence of Pseudomonas sp. HPB0071.";
RL   Submitted (MAR-2013) to the EMBL/GenBank/DDBJ databases.
CC   -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-
CC       pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:ENA28682.1}.
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DR   EMBL; AQFP01000016; ENA28682.1; -; Genomic_DNA.
DR   RefSeq; WP_010798827.1; NZ_KI517368.1.
DR   AlphaFoldDB; N2IMQ5; -.
DR   PATRIC; fig|1203578.3.peg.4395; -.
DR   HOGENOM; CLU_000445_70_20_6; -.
DR   OrthoDB; 9804951at2; -.
DR   Proteomes; UP000017050; Unassembled WGS sequence.
DR   GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-KW.
DR   GO; GO:0000155; F:phosphorelay sensor kinase activity; IEA:InterPro.
DR   GO; GO:0071555; P:cell wall organization; IEA:InterPro.
DR   CDD; cd01948; EAL; 1.
DR   CDD; cd01949; GGDEF; 1.
DR   CDD; cd00130; PAS; 1.
DR   Gene3D; 3.30.70.270; -; 1.
DR   Gene3D; 3.20.20.450; EAL domain; 1.
DR   Gene3D; 3.30.450.20; PAS domain; 1.
DR   InterPro; IPR001633; EAL_dom.
DR   InterPro; IPR035919; EAL_sf.
DR   InterPro; IPR000160; GGDEF_dom.
DR   InterPro; IPR029787; Nucleotide_cyclase.
DR   InterPro; IPR000014; PAS.
DR   InterPro; IPR035965; PAS-like_dom_sf.
DR   InterPro; IPR013656; PAS_4.
DR   InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR   InterPro; IPR011620; Sig_transdc_His_kinase_LytS_TM.
DR   NCBIfam; TIGR00254; GGDEF; 1.
DR   NCBIfam; TIGR00229; sensory_box; 1.
DR   PANTHER; PTHR44757:SF2; CYCLIC DI-GMP PHOSPHODIESTERASE PDER; 1.
DR   PANTHER; PTHR44757; DIGUANYLATE CYCLASE DGCP; 1.
DR   Pfam; PF07694; 5TM-5TMR_LYT; 1.
DR   Pfam; PF00563; EAL; 1.
DR   Pfam; PF00990; GGDEF; 1.
DR   Pfam; PF08448; PAS_4; 1.
DR   SMART; SM00052; EAL; 1.
DR   SMART; SM00267; GGDEF; 1.
DR   SUPFAM; SSF141868; EAL domain-like; 1.
DR   SUPFAM; SSF55073; Nucleotide cyclase; 1.
DR   SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR   PROSITE; PS50883; EAL; 1.
DR   PROSITE; PS50887; GGDEF; 1.
PE   4: Predicted;
KW   Cell membrane {ECO:0000256|ARBA:ARBA00022475};
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000017050};
KW   Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW   ECO:0000256|SAM:Phobius}.
FT   TRANSMEM        34..53
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        65..93
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        99..120
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        132..154
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   DOMAIN          353..490
FT                   /note="GGDEF"
FT                   /evidence="ECO:0000259|PROSITE:PS50887"
FT   DOMAIN          499..752
FT                   /note="EAL"
FT                   /evidence="ECO:0000259|PROSITE:PS50883"
FT   COILED          179..206
FT                   /evidence="ECO:0000256|SAM:Coils"
SQ   SEQUENCE   753 AA;  83219 MW;  33A133979C7E40E4 CRC64;
     MFVDFLSNAA LLLALCWLRD YLWRTWPHKV LSSELIVGCA TGLICIAVMI HPVPIGLGIF
     VDARLAILSV TALMAGPLVA SIAAAMTALY RFWLGGVGAY PGVLNAFMAV ALGLAYRMAY
     HRGWIRQGPL QVLLLGGAVH ALALLALTLV YGPFGQAAQR TMLAMMLTMP PTGLLVWLLF
     RDQEKRNQAE QALARSEARL SAITQAIPDI LLVIDQDGRF QEVVSSSHDA KKINEHLAKV
     GQRLQDVLPY TQANYLTTWV RKVLKSPTPL TVEYQLSSPA GERYFEGKAQ AIASDAEHKQ
     AIVIVTRDVT ARHEYEEQIR RLAFYDTLTE LPNRRFFLER LKTAQLACQR HGHSGALLFI
     DLDNFKNIND LYGHDAGDTV LKEAAHRLKQ IVRATDTVAR LGGDEFVILL EGLSEDEQAA
     AHQASHIGQQ VLAALERPFE FEQGNQTISG SVGIVLFDSR SASHDLLQQA DISMYSAKSH
     GKNAIRFYDP SMQSSIAARL QLEQQIRQGL LDNEFRVYYQ LQWSDQKGLI GLEALLRWQH
     PDWGLVGPAA FLEVASNTGL LTELDRWLLD EVCSQLLAWS KEPSLAHLPV SVNVCASHLR
     QSSFATEVMD VLKHKHIDPA LIKIELTEAT LILDLDQACS HIETLRGQGV RFALDDFGTG
     YSSLNYLQKL PIDQVKIDQS FVQRLPGSES VAIIQAISGL ATTFGLDIVA EGVESEAQRQ
     LLAENGCTTY QGYLFAKPLP ARDVVRAAEL AST
//
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