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Database: UniProt
Entry: N2IYZ3_9PSED
LinkDB: N2IYZ3_9PSED
Original site: N2IYZ3_9PSED 
ID   N2IYZ3_9PSED            Unreviewed;       359 AA.
AC   N2IYZ3;
DT   26-JUN-2013, integrated into UniProtKB/TrEMBL.
DT   26-JUN-2013, sequence version 1.
DT   24-JAN-2024, entry version 30.
DE   RecName: Full=D-malate dehydrogenase (decarboxylating) {ECO:0000256|ARBA:ARBA00013126};
DE            EC=1.1.1.83 {ECO:0000256|ARBA:ARBA00013126};
GN   ORFNames=HMPREF1487_06349 {ECO:0000313|EMBL:ENA32627.1};
OS   Pseudomonas sp. HPB0071.
OC   Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
OC   Pseudomonadaceae; Pseudomonas.
OX   NCBI_TaxID=1203578 {ECO:0000313|EMBL:ENA32627.1, ECO:0000313|Proteomes:UP000017050};
RN   [1] {ECO:0000313|EMBL:ENA32627.1, ECO:0000313|Proteomes:UP000017050}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=HPB0071 {ECO:0000313|EMBL:ENA32627.1,
RC   ECO:0000313|Proteomes:UP000017050};
RG   The Broad Institute Genome Sequencing Platform;
RA   Earl A., Ward D., Feldgarden M., Gevers D., Schmidt T., Dover J., Dai D.,
RA   Walker B., Young S.K., Zeng Q., Gargeya S., Fitzgerald M., Haas B.,
RA   Abouelleil A., Alvarado L., Arachchi H.M., Berlin A.M., Chapman S.B.,
RA   Dewar J., Goldberg J., Griggs A., Gujja S., Hansen M., Howarth C.,
RA   Imamovic A., Larimer J., McCowan C., Murphy C., Neiman D., Pearson M.,
RA   Priest M., Roberts A., Saif S., Shea T., Sisk P., Sykes S., Wortman J.,
RA   Nusbaum C., Birren B.;
RT   "The Genome Sequence of Pseudomonas sp. HPB0071.";
RL   Submitted (MAR-2013) to the EMBL/GenBank/DDBJ databases.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=(R)-malate + NAD(+) = CO2 + NADH + pyruvate;
CC         Xref=Rhea:RHEA:18365, ChEBI:CHEBI:15361, ChEBI:CHEBI:15588,
CC         ChEBI:CHEBI:16526, ChEBI:CHEBI:57540, ChEBI:CHEBI:57945; EC=1.1.1.83;
CC         Evidence={ECO:0000256|ARBA:ARBA00001361};
CC   -!- COFACTOR:
CC       Name=Mg(2+); Xref=ChEBI:CHEBI:18420;
CC         Evidence={ECO:0000256|ARBA:ARBA00001946};
CC   -!- COFACTOR:
CC       Name=Mn(2+); Xref=ChEBI:CHEBI:29035;
CC         Evidence={ECO:0000256|ARBA:ARBA00001936};
CC   -!- SIMILARITY: Belongs to the isocitrate and isopropylmalate
CC       dehydrogenases family. {ECO:0000256|ARBA:ARBA00007769}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:ENA32627.1}.
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DR   EMBL; AQFP01000009; ENA32627.1; -; Genomic_DNA.
DR   RefSeq; WP_010796544.1; NZ_KI517367.1.
DR   AlphaFoldDB; N2IYZ3; -.
DR   PATRIC; fig|1203578.3.peg.2056; -.
DR   HOGENOM; CLU_031953_0_1_6; -.
DR   OrthoDB; 9767905at2; -.
DR   Proteomes; UP000017050; Unassembled WGS sequence.
DR   GO; GO:0046553; F:D-malate dehydrogenase (decarboxylating) activity; IEA:UniProtKB-EC.
DR   GO; GO:0000287; F:magnesium ion binding; IEA:InterPro.
DR   GO; GO:0051287; F:NAD binding; IEA:InterPro.
DR   Gene3D; 3.40.718.10; Isopropylmalate Dehydrogenase; 1.
DR   InterPro; IPR019818; IsoCit/isopropylmalate_DH_CS.
DR   InterPro; IPR024084; IsoPropMal-DH-like_dom.
DR   InterPro; IPR011829; TTC_DH.
DR   NCBIfam; TIGR02089; TTC; 1.
DR   PANTHER; PTHR43275; D-MALATE DEHYDROGENASE [DECARBOXYLATING]; 1.
DR   PANTHER; PTHR43275:SF1; D-MALATE DEHYDROGENASE [DECARBOXYLATING]; 1.
DR   Pfam; PF00180; Iso_dh; 1.
DR   SMART; SM01329; Iso_dh; 1.
DR   SUPFAM; SSF53659; Isocitrate/Isopropylmalate dehydrogenase-like; 1.
DR   PROSITE; PS00470; IDH_IMDH; 1.
PE   3: Inferred from homology;
KW   Manganese {ECO:0000256|ARBA:ARBA00023211};
KW   Reference proteome {ECO:0000313|Proteomes:UP000017050}.
FT   DOMAIN          7..355
FT                   /note="Isopropylmalate dehydrogenase-like"
FT                   /evidence="ECO:0000259|SMART:SM01329"
SQ   SEQUENCE   359 AA;  39567 MW;  467C717120E615AC CRC64;
     MSTPCYRIAV IPGDGIGKEV MPEGIRVMDA AAKAFNLTLQ WDWFDFACAD YYVKHGKMMP
     DNWFERLKGY DAIYFGAVGW PEVVPDHVSL WESLLKFRRD FDQYVNLRPC RLMPGVRSPL
     ANRKPGDIDF YVVRENTEGE YSSIGGKMFA GTEREVVMQE TVMSRIGVDR ILKFAFELAQ
     RRPKKHLTSA TKSNGISITM PYWDERVEAM AAGYPEVKID KYHIDILTAN FVLHPNWFDV
     VVASNLFGDI LSDLGPACTG TIGIAPSANI NPDRRFPSLF EPVHGSAPDI AGQGIANPIG
     QIWCGAMMLE HLGHHDAGAA VLAAIETVLA KGPDNAPLTR DIGGTGTTEA LGKAIAAQF
//
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