ID N4V838_COLOR Unreviewed; 700 AA.
AC N4V838;
DT 26-JUN-2013, integrated into UniProtKB/TrEMBL.
DT 26-JUN-2013, sequence version 1.
DT 27-MAR-2024, entry version 43.
DE SubName: Full=Pumilio-like proteiny domain family member 6 {ECO:0000313|EMBL:TDZ22236.1};
GN ORFNames=Cob_v005173 {ECO:0000313|EMBL:TDZ22236.1};
OS Colletotrichum orbiculare (strain 104-T / ATCC 96160 / CBS 514.97 / LARS
OS 414 / MAFF 240422) (Cucumber anthracnose fungus) (Colletotrichum
OS lagenarium).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes;
OC Hypocreomycetidae; Glomerellales; Glomerellaceae; Colletotrichum;
OC Colletotrichum orbiculare species complex.
OX NCBI_TaxID=1213857 {ECO:0000313|EMBL:TDZ22236.1, ECO:0000313|Proteomes:UP000014480};
RN [1] {ECO:0000313|Proteomes:UP000014480}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=104-T / ATCC 96160 / CBS 514.97 / LARS 414 / MAFF 240422
RC {ECO:0000313|Proteomes:UP000014480};
RX PubMed=23252678; DOI=10.1111/nph.12085;
RA Gan P., Ikeda K., Irieda H., Narusaka M., O'Connell R.J., Narusaka Y.,
RA Takano Y., Kubo Y., Shirasu K.;
RT "Comparative genomic and transcriptomic analyses reveal the hemibiotrophic
RT stage shift of Colletotrichum fungi.";
RL New Phytol. 197:1236-1249(2013).
RN [2] {ECO:0000313|Proteomes:UP000014480}
RP GENOME REANNOTATION.
RC STRAIN=104-T / ATCC 96160 / CBS 514.97 / LARS 414 / MAFF 240422
RC {ECO:0000313|Proteomes:UP000014480};
RX PubMed=30893003; DOI=10.1094/MPMI-12-18-0352-A;
RA Gan P., Tsushima A., Narusaka M., Narusaka Y., Takano Y., Kubo Y.,
RA Shirasu K.;
RT "Genome sequence resources for four phytopathogenic fungi from the
RT Colletotrichum orbiculare species complex.";
RL Mol. Plant Microbe Interact. 32:1088-1090(2019).
CC -!- FUNCTION: RNA-binding nucleolar protein required for pre-rRNA
CC processing. Involved in production of 18S rRNA and assembly of small
CC ribosomal subunit. {ECO:0000256|ARBA:ARBA00024893}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:TDZ22236.1}.
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DR EMBL; AMCV02000011; TDZ22236.1; -; Genomic_DNA.
DR AlphaFoldDB; N4V838; -.
DR STRING; 1213857.N4V838; -.
DR EnsemblFungi; ENH77091; ENH77091; Cob_01719.
DR eggNOG; KOG2050; Eukaryota.
DR HOGENOM; CLU_013994_1_0_1; -.
DR OrthoDB; 5479527at2759; -.
DR Proteomes; UP000014480; Unassembled WGS sequence.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR Gene3D; 1.25.10.10; Leucine-rich Repeat Variant; 1.
DR InterPro; IPR011989; ARM-like.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR012959; CPL_dom.
DR InterPro; IPR033133; PUM-HD.
DR InterPro; IPR040059; PUM3.
DR InterPro; IPR001313; Pumilio_RNA-bd_rpt.
DR PANTHER; PTHR13389:SF0; PUMILIO HOMOLOG 3; 1.
DR PANTHER; PTHR13389; UNCHARACTERIZED; 1.
DR Pfam; PF08144; CPL; 1.
DR SMART; SM00025; Pumilio; 5.
DR SUPFAM; SSF48371; ARM repeat; 1.
DR PROSITE; PS50303; PUM_HD; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000014480};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884}.
SQ SEQUENCE 700 AA; 77477 MW; 4941769176D93972 CRC64;
MATDGVKAGS KRKSASAGKG VSDGKSKKIK VEKKKPAPVE TLEDDLDDAE VSSDSEDGGV
ELNPRERAKQ AQEKGKKEGA KGAAGQGKNF QFGQNSKESH AIQKKLALDR KAAKPLADEL
QRTKKIWERL RRKSHVPSEE RKQLVEELFT IITGRIKDFV LKHDATRAVQ TAIKYATAAQ
RKQITRELQG TYTQLAESRY AKFLIAKLVV QADTEIKDLI IPEFYGKVRK LINHPEASWI
LDDIYRQIAT KEQKSILLRE WYGPEFAIME RSKEEKPTSD LAAILESNPS KRGPIMKSLS
DMINSLVQKK MTGFTMLHDA MLQYFLNLKA GTEEFTMFVE MIKDDETGDL MKNMAFTRSG
SRLVALLFAH GAAKDRRSLL KVFKDNFVLM SGDPFAHLVI LTAFDVIDDT KMTSKAIFPE
LIGDDKEKAT ENIIVATTNP FARTTLLYLL EGQSKALFPA SMSENLAILK EVHEIRQTTS
KKEPEVRRKE LVAAMSPALI EAVQKEAANL IGDPFGCQLV ADVLLSADGD KTKALEAVAS
VAEGDPSAEP MEEDGIATPI HVSRTPYGGR LLKTLIAGGK FNKETGKVEP VEPPLKFADI
LYPVIRDYVV DWATGPSSFV VLNLLEAEDF SHASELKKTL KSHKKQLQKA ATEETAEQKE
AKAQREADKN EKGAKKGKKG GVKSEKPVGN LGSKLLLEKL
//
