ID O41351_TNVD Unreviewed; 268 AA.
AC O41351;
DT 01-JAN-1998, integrated into UniProtKB/TrEMBL.
DT 01-JAN-1998, sequence version 1.
DT 24-JAN-2024, entry version 62.
DE RecName: Full=Capsid protein {ECO:0000256|ARBA:ARBA00018091};
OS Tobacco necrosis virus (strain D) (TNV-D).
OC Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Tolucaviricetes;
OC Tolivirales; Tombusviridae; Procedovirinae; Betanecrovirus;
OC Betanecrovirus nicotianae.
OX NCBI_TaxID=12056 {ECO:0000313|EMBL:AAC57950.1};
OH NCBI_TaxID=66262; Chenopodium amaranticolor.
OH NCBI_TaxID=63459; Chenopodium quinoa (Quinoa).
OH NCBI_TaxID=3659; Cucumis sativus (Cucumber).
OH NCBI_TaxID=81866; Nicotiana clevelandii (Wild tobacco).
OH NCBI_TaxID=4097; Nicotiana tabacum (Common tobacco).
OH NCBI_TaxID=3885; Phaseolus vulgaris (Kidney bean) (French bean).
OH NCBI_TaxID=13306; Tulipa gesneriana (Garden tulip).
RN [1] {ECO:0000313|EMBL:AAC57950.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=D {ECO:0000313|EMBL:AAC57950.1};
RX PubMed=9191913;
RA Molnar A., Havelda Z., Dalmay T., Szutorisz H., Burgyan J.;
RT "Complete nucleotide sequence of tobacco necrosis virus strain DH and genes
RT required for RNA replication and virus movement.";
RL J. Gen. Virol. 78:1235-1239(1997).
CC -!- SIMILARITY: Belongs to the icosahedral plant coat protein family.
CC {ECO:0000256|ARBA:ARBA00007446}.
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DR EMBL; U62546; AAC57950.1; -; Genomic_RNA.
DR RefSeq; NP_608316.1; NC_003487.1.
DR GeneID; 935277; -.
DR KEGG; vg:935277; -.
DR OrthoDB; 9667at10239; -.
DR Proteomes; UP000203805; Genome.
DR GO; GO:0039617; C:T=3 icosahedral viral capsid; IEA:UniProtKB-KW.
DR GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR Gene3D; 2.60.120.20; -; 1.
DR InterPro; IPR000937; Capsid_prot_S-dom_vir.
DR InterPro; IPR029053; Viral_coat.
DR Pfam; PF00729; Viral_coat; 1.
DR PRINTS; PR00233; ICOSAHEDRAL.
DR SUPFAM; SSF88633; Positive stranded ssRNA viruses; 1.
DR PROSITE; PS00555; ICOSAH_VIR_COAT_S; 1.
PE 3: Inferred from homology;
KW Capsid protein {ECO:0000313|EMBL:AAC57950.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000203805};
KW T=3 icosahedral capsid protein {ECO:0000256|ARBA:ARBA00023060};
KW Virion {ECO:0000256|ARBA:ARBA00023060}.
FT DOMAIN 56..263
FT /note="Icosahedral viral capsid protein S"
FT /evidence="ECO:0000259|Pfam:PF00729"
SQ SEQUENCE 268 AA; 29034 MW; 1F755B46CD8783B1 CRC64;
MPKRGRVGLA ESFQSKSKKQ KEAEYNAFQR EKMERALVNN ATAARKGSGM SFRPLTVPVA
GSVIYSRPRV PQVRTNQMST FVVNTELVAN ITLAAAGAFS FTTQPLIPSF GSWLANIADL
YSKWRWISCS VVYIPKCPTS TQGSVVMAIV YDAQDTVPTT RTQVSQCYQS ITFPPYAGYG
GASALNHKGS SGESLVSTLD TNRVDKKWYS TIGNAAFTAL TSIDKNQFCP ATAIIAGDGG
PVAATAVGDI FMRYEIEFIE PVNPTINI
//