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Entry: O69765_PSEPU
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Original site: O69765_PSEPU 
ID   O69765_PSEPU            Unreviewed;       657 AA.
AC   O69765;
DT   01-AUG-1998, integrated into UniProtKB/TrEMBL.
DT   01-AUG-1998, sequence version 1.
DT   13-SEP-2023, entry version 79.
DE   SubName: Full=Integrase {ECO:0000313|EMBL:CAA06238.1};
GN   Name=int {ECO:0000313|EMBL:CAA06238.1};
GN   Synonyms=intB13 {ECO:0000313|EMBL:CAE92851.1};
OS   Pseudomonas putida (Arthrobacter siderocapsulatus).
OC   Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
OC   Pseudomonadaceae; Pseudomonas.
OX   NCBI_TaxID=303 {ECO:0000313|EMBL:CAA06238.1};
RN   [1] {ECO:0000313|EMBL:CAA06238.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=F1 {ECO:0000313|EMBL:CAA06238.1}, and Strain RR21
RC   {ECO:0000313|EMBL:CAE92851.1};
RX   PubMed=9791097;
RA   Ravatn R., Studer S., Zender A.J.B., van der Meer J.R.;
RT   "Int-B13, an unusual site-specific recombinase of the bacteriophage P4
RT   integrase family, is responsible for chromosomal insertion of the 105-
RT   kilobase clc element of Pseudomonas sp. Strain B13.";
RL   J. Bacteriol. 180:5505-5514(1998).
RN   [2] {ECO:0000313|EMBL:CAA06238.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=F1 {ECO:0000313|EMBL:CAA06238.1};
RA   Ravatn R., Zehnder A.J.B., van der Meer J.R.;
RT   "Low frequency horizontal transfer of an element containing the
RT   chlorocatechol degradative genes from Pseudomonas sp. strain B13 to
RT   Pseudomonas putida F1 and to indigenous bacteria in laboratory scale
RT   activated sludge microcosms.";
RL   Submitted (APR-1998) to the EMBL/GenBank/DDBJ databases.
RN   [3] {ECO:0000313|EMBL:CAE92851.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=Strain RR21 {ECO:0000313|EMBL:CAE92851.1};
RX   PubMed=12823813; DOI=10.1046/j.1365-2958.2003.03548.x;
RA   Sentchilo V., Zehnder A.J.B., van der Meer J.R.;
RT   "Characterization of two alternative promoters and a transcription
RT   regulator for integrase expression in the clc catabolic genomic island of
RT   Pseudomonas sp. strain B13.";
RL   Mol. Microbiol. 49:93-104(2003).
RN   [4] {ECO:0000313|EMBL:CAE92851.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=Strain RR21 {ECO:0000313|EMBL:CAE92851.1};
RX   PubMed=16484212; DOI=10.1128/JB.188.5.1999-2013.2006;
RA   Gaillard M., Vallaeys T., Vorhoelter F.J., Minoia M., Werlen C.,
RA   Sentchilo V., Puhler A., van der Meer J.R.;
RT   "The clc element of Pseudomonas sp. strain B13, a genomic island with
RT   various catabolic properties.";
RL   J. Bacteriol. 188:1999-2013(2006).
RN   [5] {ECO:0000313|EMBL:CAE92851.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=Strain RR21 {ECO:0000313|EMBL:CAE92851.1};
RA   van der Meer J.R.;
RL   Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; AJ004950; CAA06238.1; -; Genomic_DNA.
DR   EMBL; AJ617740; CAE92851.1; -; Genomic_DNA.
DR   AlphaFoldDB; O69765; -.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0015074; P:DNA integration; IEA:UniProtKB-KW.
DR   GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR   GO; GO:0075713; P:establishment of integrated proviral latency; IEA:UniProtKB-KW.
DR   GO; GO:0046718; P:viral entry into host cell; IEA:UniProtKB-KW.
DR   GO; GO:0044826; P:viral genome integration into host DNA; IEA:UniProtKB-KW.
DR   CDD; cd00801; INT_P4_C; 1.
DR   Gene3D; 1.10.150.130; -; 1.
DR   Gene3D; 3.30.160.390; Integrase, DNA-binding domain; 1.
DR   Gene3D; 1.10.443.10; Intergrase catalytic core; 1.
DR   InterPro; IPR044068; CB.
DR   InterPro; IPR011010; DNA_brk_join_enz.
DR   InterPro; IPR013762; Integrase-like_cat_sf.
DR   InterPro; IPR002104; Integrase_catalytic.
DR   InterPro; IPR038488; Integrase_DNA-bd_sf.
DR   InterPro; IPR025166; Integrase_DNA_bind_dom.
DR   InterPro; IPR010998; Integrase_recombinase_N.
DR   InterPro; IPR004107; Integrase_SAM-like_N.
DR   PANTHER; PTHR30629; PROPHAGE INTEGRASE; 1.
DR   PANTHER; PTHR30629:SF2; PROPHAGE INTEGRASE INTS-RELATED; 1.
DR   Pfam; PF13356; Arm-DNA-bind_3; 1.
DR   Pfam; PF14659; Phage_int_SAM_3; 1.
DR   Pfam; PF00589; Phage_integrase; 1.
DR   SUPFAM; SSF56349; DNA breaking-rejoining enzymes; 1.
DR   PROSITE; PS51900; CB; 1.
DR   PROSITE; PS51898; TYR_RECOMBINASE; 1.
PE   4: Predicted;
KW   DNA integration {ECO:0000256|ARBA:ARBA00022908};
KW   DNA recombination {ECO:0000256|ARBA:ARBA00023172};
KW   DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|PROSITE-
KW   ProRule:PRU01248};
KW   Viral genome integration {ECO:0000256|ARBA:ARBA00023195};
KW   Virus entry into host cell {ECO:0000256|ARBA:ARBA00023296}.
FT   DOMAIN          112..196
FT                   /note="Core-binding (CB)"
FT                   /evidence="ECO:0000259|PROSITE:PS51900"
FT   DOMAIN          221..414
FT                   /note="Tyr recombinase"
FT                   /evidence="ECO:0000259|PROSITE:PS51898"
SQ   SEQUENCE   657 AA;  73940 MW;  3E221A57B1B9D864 CRC64;
     MTSIGPKSLL RSLEMALSDL IVRQAKTTGK RYTLYDNDCL SLMVSAAGGK SWMFRYSWLG
     KQKRMALGGY PALSLREARA ERDKAQALIA RGIDPQIERD QRRHAAKLAG EYTFKNVFDA
     WVEHRRKELK EGRQSTLSQI LRIFNKDVLP TLGKMSIYDI RRPQLLGVLA AIEKRKAFTT
     AEKVRTWFNQ MFRYALVIAE GLEVNPAADL DVVAEPKPPV AHNPYLHLPE LPEFLQKLRR
     YNPRGWQTQL GVRLLFLTGV RTGELRLAEP EQFDLDRGFW IIPPEVVKQL QDEMRKAGKR
     PQDVPPYIVP LSLQAIEIVR YLLGVMRPAQ KYLLSHRSEL KKRISENTLN KAVQLMGYEG
     RLTGHGIRGT ISTALNEIGY PKIWVDAQLS HSDPNKVSSA YNHAKYVEPR RRMMQDWADR
     LDLLEQGEVQ AASAHLTIRI DGVPAMAEVE EAVDVAPTVA EPGVSGSPPV AATPIVVTPN
     SGGITFQRLS QVPPPPAHAP ESEVSAIQRE REEMLAMYES PNNLPVALFG KLAGKSKDQI
     NRELKAGKLL SISLGNRGQR VPDWQLVPLK RRLAQALMNQ CPHVDSWALY RLLTKPHSNL
     GNRAAIDVVT PTNVGKVLQA VTPYKEFERS STDETPQFSE FVRQLQRHVN ALEEAPC
//
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