ID YIDZ_ECOLI Reviewed; 319 AA.
AC P31463; Q2M827;
DT 01-JUL-1993, integrated into UniProtKB/Swiss-Prot.
DT 01-JUL-1993, sequence version 1.
DT 01-MAY-2013, entry version 103.
DE RecName: Full=HTH-type transcriptional regulator YidZ;
GN Name=yidZ; OrderedLocusNames=b3711, JW3689;
OS Escherichia coli (strain K12).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83333;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=7686882; DOI=10.1006/geno.1993.1230;
RA Burland V.D., Plunkett G. III, Daniels D.L., Blattner F.R.;
RT "DNA sequence and analysis of 136 kilobases of the Escherichia coli
RT genome: organizational symmetry around the origin of replication.";
RL Genomics 16:551-561(1993).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J.,
RA Mau B., Shao Y.;
RT "The complete genome sequence of Escherichia coli K-12.";
RL Science 277:1453-1474(1997).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=16738553; DOI=10.1038/msb4100049;
RA Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT "Highly accurate genome sequences of Escherichia coli K-12 strains
RT MG1655 and W3110.";
RL Mol. Syst. Biol. 2:E1-E5(2006).
RN [4]
RP CHARACTERIZATION.
RX PubMed=15546870; DOI=10.1074/jbc.M411070200;
RA Justino M.C., Vicente J.B., Teixeira M., Saraiva L.M.;
RT "New genes implicated in the protection of anaerobically grown
RT Escherichia coli against nitric oxide.";
RL J. Biol. Chem. 280:2636-2643(2005).
CC -!- FUNCTION: Involved in anaerobic NO protection.
CC -!- SIMILARITY: Contains 1 HTH lysR-type DNA-binding domain.
CC -----------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution-NoDerivs License
CC -----------------------------------------------------------------------
DR EMBL; L10328; AAA62062.1; -; Genomic_DNA.
DR EMBL; U00096; AAC76734.1; -; Genomic_DNA.
DR EMBL; AP009048; BAE77579.1; -; Genomic_DNA.
DR PIR; H65173; H65173.
DR RefSeq; NP_418167.1; NC_000913.2.
DR RefSeq; YP_491720.1; NC_007779.1.
DR ProteinModelPortal; P31463; -.
DR SMR; P31463; 99-316.
DR DIP; DIP-12458N; -.
DR IntAct; P31463; 2.
DR MINT; MINT-1257535; -.
DR STRING; 511145.b3711; -.
DR DNASU; 948227; -.
DR EnsemblBacteria; AAC76734; AAC76734; b3711.
DR EnsemblBacteria; BAE77579; BAE77579; BAE77579.
DR GeneID; 12933603; -.
DR GeneID; 948227; -.
DR KEGG; ecj:Y75_p3459; -.
DR KEGG; eco:b3711; -.
DR PATRIC; 32122917; VBIEscCol129921_3834.
DR EchoBASE; EB1672; -.
DR EcoGene; EG11721; yidZ.
DR eggNOG; COG0583; -.
DR HOGENOM; HOG000103694; -.
DR OMA; MEQDLAD; -.
DR ProtClustDB; PRK10216; -.
DR BioCyc; EcoCyc:EG11721-MONOMER; -.
DR BioCyc; ECOL316407:JW3689-MONOMER; -.
DR Genevestigator; P31463; -.
DR GO; GO:0003677; F:DNA binding; IEA:HAMAP.
DR GO; GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:HAMAP.
DR GO; GO:0006351; P:transcription, DNA-dependent; IMP:EcoCyc.
DR Gene3D; 1.10.10.10; -; 1.
DR HAMAP; MF_01607; HTH-type_YidZ; 1; -.
DR InterPro; IPR005119; LysR_subst-bd.
DR InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR InterPro; IPR023746; Tscrpt_reg_YidZ.
DR InterPro; IPR011991; WHTH_DNA-bd_dom.
DR Pfam; PF00126; HTH_1; 1.
DR Pfam; PF03466; LysR_substrate; 1.
DR PROSITE; PS50931; HTH_LYSR; 1.
PE 1: Evidence at protein level;
KW Complete proteome; DNA-binding; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1 319 HTH-type transcriptional regulator YidZ.
FT /FTId=PRO_0000105801.
FT DOMAIN 8 65 HTH lysR-type.
FT DNA_BIND 25 44 H-T-H motif (By similarity).
SQ SEQUENCE 319 AA; 36882 MW; 8E49CF88397EB125 CRC64;
MKKSITTLDL NLLLCLQLLM QERSVTKAAK RINVTPSAVS KSLAKLRAWF DDPLFVNSPL
GLSPTPLMVS MEQNLAEWMQ MSNLLLDKPH HQTPRGLKFE LAAESPLMMI MLNALSKQIY
QRYPQATIKL RNWDYDSLDA ITRGEVDIGF SGRESHPRSR ELLSSLPLAI DYEVLFSDVP
CVWLRKDHPA LHQTWNLDTF LRYPHISICW EQSDTWALDN VLQELGRERT IAMSLPEFEQ
SLFMAAQPDN LLLATAPRYC QYYNQLHQLP LVALPLPFDE SQQKKLEVPF TLLWHKRNSH
NPKIVWLRET IKNLYASMA
//
