ID P89207_9POTV Unreviewed; 589 AA.
AC P89207;
DT 01-MAY-1997, integrated into UniProtKB/TrEMBL.
DT 01-MAY-1997, sequence version 1.
DT 27-MAR-2024, entry version 98.
DE RecName: Full=Genome polyprotein {ECO:0000256|ARBA:ARBA00020107};
DE Flags: Fragment;
OS Sugarcane mosaic virus.
OC Viruses; Riboviria; Orthornavirae; Pisuviricota; Stelpaviricetes;
OC Patatavirales; Potyviridae; Potyvirus.
OX NCBI_TaxID=12224 {ECO:0000313|EMBL:AAB70861.1};
RN [1] {ECO:0000313|EMBL:AAB70861.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=E {ECO:0000313|EMBL:AAB70861.1};
RX AGRICOLA=IND20629194;
RA Mirkov T.E., Yang Z.N.;
RT "Sequence and relationships of Sugarcane Mosaic and Sorghum Mosaic Virus
RT strains, and development of RT-PCR based RFLPs for strain discrimination.";
RL Phytopathology 87:932-939(1997).
CC -!- FUNCTION: Involved in aphid transmission, cell-to-cell and systemis
CC movement, encapsidation of the viral RNA and in the regulation of viral
CC RNA amplification. {ECO:0000256|ARBA:ARBA00029405}.
CC -!- SUBCELLULAR LOCATION: Virion {ECO:0000256|ARBA:ARBA00004328}.
CC -!- SIMILARITY: Belongs to the potyviridae genome polyprotein family.
CC {ECO:0000256|ARBA:ARBA00006064, ECO:0000256|RuleBase:RU003351}.
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DR EMBL; U57357; AAB70861.1; -; mRNA.
DR GO; GO:0019028; C:viral capsid; IEA:UniProtKB-KW.
DR GO; GO:0000166; F:nucleotide binding; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0003968; F:RNA-dependent RNA polymerase activity; IEA:UniProtKB-KW.
DR GO; GO:0006351; P:DNA-templated transcription; IEA:InterPro.
DR GO; GO:0039694; P:viral RNA genome replication; IEA:InterPro.
DR CDD; cd23175; ps-ssRNAv_Potyviridae_RdRp; 1.
DR Gene3D; 3.30.70.270; -; 1.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR001592; Poty_coat.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR InterPro; IPR001205; RNA-dir_pol_C.
DR InterPro; IPR007094; RNA-dir_pol_PSvirus.
DR Pfam; PF00767; Poty_coat; 1.
DR Pfam; PF00680; RdRP_1; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR PROSITE; PS50507; RDRP_SSRNA_POS; 1.
PE 2: Evidence at transcript level;
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695};
KW RNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022484};
KW Transferase {ECO:0000256|ARBA:ARBA00022679};
KW Viral RNA replication {ECO:0000256|ARBA:ARBA00022953};
KW Virion {ECO:0000256|ARBA:ARBA00022844}.
FT DOMAIN 1..122
FT /note="RdRp catalytic"
FT /evidence="ECO:0000259|PROSITE:PS50507"
FT REGION 280..360
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 558..589
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 309..350
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:AAB70861.1"
SQ SEQUENCE 589 AA; 65432 MW; 43BC55FD2C20B6B7 CRC64;
CDADGSQFDS SLTPYLLNAV LHIRLQFMEE WELGAQMLRN LYTEIVYTPI ATPDGSIIKK
FKGNNSGQPS TVVDNTLMVI LAFNYAMLSS GIQDNEIDNC CRMFANGDDL LLAVHPDYEH
ILDGFQTHFG NLGLNFEFNS RTREKSNLWF MSTQGLKYEG IYIPKLEKER IVAILEWDRS
NLPEHRLEAI CAAMVEAWGY SDLIHEIRKF YAWLLEMQPF ANLAKEGLAP YIAETALRNL
YLGSGIKEEE IEKYFKQFAK DLPGYLEDYN EEVFHQAGTV DAGAQGGGGN AGTQPPATGA
AAQGGAQPPT TGAAAQPPAT QGSQPPTGGA TGGGGAQTGA GGNSSITGGQ KDKDVDAGTT
GKITVPKLKA MSKKMRLPKA KGKDVLHLDF LLTYKPQQQD ISNTRATREE FDRWYEAIKK
EYEIDDTQMT VVMSGLMVWC IENGCSPNIN GNWTMMDGDE QRAFPLKPII ENASPTFRQI
MHHFSDAAEA YIEYRNSTER YMPRYGLQRN LTDYSLARYA FDFYEITSRT PARAKEAHMQ
MKAAAVRGSN TRLFGLDGNV GETQENTERH TAGDVSRNMH SLLGVQQHH
//
