ID PP149_ARATH Reviewed; 536 AA.
AC Q9ZUE9;
DT 16-DEC-2008, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-1999, sequence version 1.
DT 27-MAR-2024, entry version 123.
DE RecName: Full=Pentatricopeptide repeat-containing protein At2g06000;
GN OrderedLocusNames=At2g06000; ORFNames=T6P5.20;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
RA Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
RA Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
RA Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y.,
RA Shinozaki K.;
RT "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP GENE FAMILY.
RX PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA Taconnat L., Small I.;
RT "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT reveals their essential role in organelle biogenesis.";
RL Plant Cell 16:2089-2103(2004).
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily. {ECO:0000305}.
CC -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC URL="https://ppr.plantenergy.uwa.edu.au";
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DR EMBL; AC005970; AAC95177.1; -; Genomic_DNA.
DR EMBL; CP002685; AEC05990.1; -; Genomic_DNA.
DR EMBL; CP002685; AEC05991.1; -; Genomic_DNA.
DR EMBL; AK228150; BAF00106.1; -; mRNA.
DR PIR; A84474; A84474.
DR RefSeq; NP_178657.1; NM_126613.4.
DR RefSeq; NP_973429.1; NM_201700.3.
DR AlphaFoldDB; Q9ZUE9; -.
DR SMR; Q9ZUE9; -.
DR STRING; 3702.Q9ZUE9; -.
DR PaxDb; 3702-AT2G06000-2; -.
DR ProteomicsDB; 249416; -.
DR EnsemblPlants; AT2G06000.1; AT2G06000.1; AT2G06000.
DR EnsemblPlants; AT2G06000.2; AT2G06000.2; AT2G06000.
DR GeneID; 815153; -.
DR Gramene; AT2G06000.1; AT2G06000.1; AT2G06000.
DR Gramene; AT2G06000.2; AT2G06000.2; AT2G06000.
DR KEGG; ath:AT2G06000; -.
DR Araport; AT2G06000; -.
DR TAIR; AT2G06000; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_49_0_1; -.
DR InParanoid; Q9ZUE9; -.
DR OMA; TVNILMR; -.
DR OrthoDB; 386124at2759; -.
DR PhylomeDB; Q9ZUE9; -.
DR PRO; PR:Q9ZUE9; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; Q9ZUE9; baseline and differential.
DR Genevisible; Q9ZUE9; AT.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 9.
DR PANTHER; PTHR46128; MITOCHONDRIAL GROUP I INTRON SPLICING FACTOR CCM1; 1.
DR PANTHER; PTHR46128:SF176; PPR_LONG DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF01535; PPR; 2.
DR Pfam; PF13041; PPR_2; 4.
DR PROSITE; PS51375; PPR; 11.
PE 2: Evidence at transcript level;
KW Reference proteome; Repeat.
FT CHAIN 1..536
FT /note="Pentatricopeptide repeat-containing protein
FT At2g06000"
FT /id="PRO_0000356009"
FT REPEAT 102..136
FT /note="PPR 1"
FT REPEAT 137..167
FT /note="PPR 2"
FT REPEAT 170..200
FT /note="PPR 3"
FT REPEAT 205..239
FT /note="PPR 4"
FT REPEAT 240..274
FT /note="PPR 5"
FT REPEAT 276..310
FT /note="PPR 6"
FT REPEAT 311..345
FT /note="PPR 7"
FT REPEAT 346..380
FT /note="PPR 8"
FT REPEAT 381..415
FT /note="PPR 9"
FT REPEAT 416..450
FT /note="PPR 10"
FT REPEAT 451..485
FT /note="PPR 11"
FT REPEAT 486..523
FT /note="PPR 12"
SQ SEQUENCE 536 AA; 59773 MW; B5B70BE493E8AA1F CRC64;
MIRTTFATAI AHFHTHSHGG AQARPLQNNT REVIHCPEAW LVKIVSTLFV YRVPDSDLCF
CYLSKNLNPF ISFEVVKKLD NNPHIGFRFW EFSRFKLNIR HSFWTYNLLT RSLCKAGLHD
LAGQMFECMK SDGVSPNNRL LGFLVSSFAE KGKLHFATAL LLQSFEVEGC CMVVNSLLNT
LVKLDRVEDA MKLFDEHLRF QSCNDTKTFN ILIRGLCGVG KAEKALELLG VMSGFGCEPD
IVTYNTLIQG FCKSNELNKA SEMFKDVKSG SVCSPDVVTY TSMISGYCKA GKMREASSLL
DDMLRLGIYP TNVTFNVLVD GYAKAGEMLT AEEIRGKMIS FGCFPDVVTF TSLIDGYCRV
GQVSQGFRLW EEMNARGMFP NAFTYSILIN ALCNENRLLK ARELLGQLAS KDIIPQPFMY
NPVIDGFCKA GKVNEANVIV EEMEKKKCKP DKITFTILII GHCMKGRMFE AVSIFHKMVA
IGCSPDKITV SSLLSCLLKA GMAKEAYHLN QIARKGQSNN VVPLETKTAN ATLAAC
//
