ID Q00LF4_9GAMM Unreviewed; 284 AA.
AC Q00LF4;
DT 14-NOV-2006, integrated into UniProtKB/TrEMBL.
DT 14-NOV-2006, sequence version 1.
DT 03-MAY-2023, entry version 41.
DE SubName: Full=RNA polymerase sigma-70 factor {ECO:0000313|EMBL:ABF82645.1};
DE Flags: Fragment;
GN Name=rpoD {ECO:0000313|EMBL:ABF82645.1};
OS Aeromonas sp. MDC 364.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Aeromonadales;
OC Aeromonadaceae; Aeromonas.
OX NCBI_TaxID=375499 {ECO:0000313|EMBL:ABF82645.1};
RN [1] {ECO:0000313|EMBL:ABF82645.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=MDC364 {ECO:0000313|EMBL:ABF82645.1};
RX PubMed=17012583; DOI=10.1099/ijs.0.64351-0;
RA Saavedra M.J., Figueras M.J., Martinez-Murcia A.J.;
RT "Updated phylogeny of the genus Aeromonas.";
RL Int. J. Syst. Evol. Microbiol. 56:2481-2487(2006).
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DR EMBL; DQ411520; ABF82645.1; -; Genomic_DNA.
DR AlphaFoldDB; Q00LF4; -.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0016987; F:sigma factor activity; IEA:InterPro.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR Gene3D; 1.10.601.10; RNA Polymerase Primary Sigma Factor; 1.
DR InterPro; IPR009042; RNA_pol_sigma70_r1_2.
DR InterPro; IPR007631; RNA_pol_sigma_70_non-ess.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR Pfam; PF04546; Sigma70_ner; 1.
DR Pfam; PF00140; Sigma70_r1_2; 1.
DR SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils}.
FT DOMAIN 1..23
FT /note="RNA polymerase sigma-70 region 1.2"
FT /evidence="ECO:0000259|Pfam:PF00140"
FT DOMAIN 34..249
FT /note="RNA polymerase sigma factor 70 non-essential"
FT /evidence="ECO:0000259|Pfam:PF04546"
FT REGION 80..117
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 231..279
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 84..111
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:ABF82645.1"
FT NON_TER 284
FT /evidence="ECO:0000313|EMBL:ABF82645.1"
SQ SEQUENCE 284 AA; 32449 MW; E9CBEE004AE5761C CRC64;
EMGTVELLTR EGEIDIAKRI EDGINQVQSS VAEYPEAITY LLEQYDKYEA EQLRLSDIIS
GFIDPNETED MAPTATHIGS ELGEDDLADE DEEDEEDEDE DGDSSDDDGD GGPDPEVARE
KFGELRAQYE VTRLSIQKNG RAHEDTQAAI AQLADVFRQF RLMPKQFDRL VNNMREMMER
VRVQERIIMK LCVEQAKMPK KTFVAAFTNN ECETAWFEYQ KQAGKAWSPR LVEMDEDIQR
AIGKLQQIEE ETGLSIAQIK DINRRMSIGE AKARRAKKEM VEAN
//
