ID Q058G5_ARATH Unreviewed; 118 AA.
AC Q058G5;
DT 14-NOV-2006, integrated into UniProtKB/TrEMBL.
DT 14-NOV-2006, sequence version 1.
DT 24-JAN-2024, entry version 103.
DE SubName: Full=At1g61410 {ECO:0000313|EMBL:ABJ98585.1};
DE SubName: Full=DNA double-strand break repair and VJ recombination XRCC4 {ECO:0000313|EMBL:AEE33833.1};
GN OrderedLocusNames=At1g61410 {ECO:0000313|Araport:AT1G61410,
GN ECO:0000313|EMBL:AEE33833.1};
GN ORFNames=T1F9.10 {ECO:0000313|EMBL:AEE33833.1}, T1F9_10
GN {ECO:0000313|EMBL:AEE33833.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702 {ECO:0000313|EMBL:ABJ98585.1};
RN [1] {ECO:0000313|EMBL:AEE33833.1, ECO:0000313|Proteomes:UP000006548}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2] {ECO:0000313|EMBL:ABJ98585.1}
RP NUCLEOTIDE SEQUENCE.
RA Quinitio C., Chen H., Kim C.J., Shinn P., Ecker J.R.;
RT "Arabidopsis ORF Clones.";
RL Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:AEE33833.1}
RP NUCLEOTIDE SEQUENCE.
RG TAIR;
RA Swarbreck D., Lamesch P., Wilks C., Huala E.;
RL Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases.
RN [4] {ECO:0000313|EMBL:AEE33833.1}
RP NUCLEOTIDE SEQUENCE.
RA Krishnakumar V., Cheng C.-Y., Chan A.P., Schobel S., Kim M., Ferlanti E.S.,
RA Belyaeva I., Rosen B.D., Micklem G., Miller J.R., Vaughn M., Town C.D.;
RL Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases.
RN [5] {ECO:0000313|Proteomes:UP000006548}
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
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DR EMBL; BT029253; ABJ98585.1; -; mRNA.
DR EMBL; CP002684; AEE33833.1; -; Genomic_DNA.
DR RefSeq; NP_564776.1; NM_104822.3.
DR AlphaFoldDB; Q058G5; -.
DR SMR; Q058G5; -.
DR STRING; 3702.Q058G5; -.
DR PaxDb; 3702-AT1G61410-1; -.
DR EnsemblPlants; AT1G61410.1; AT1G61410.1; AT1G61410.
DR GeneID; 842435; -.
DR Gramene; AT1G61410.1; AT1G61410.1; AT1G61410.
DR KEGG; ath:AT1G61410; -.
DR Araport; AT1G61410; -.
DR TAIR; AT1G61410; -.
DR eggNOG; ENOG502QWJA; Eukaryota.
DR HOGENOM; CLU_154177_0_0_1; -.
DR OMA; ICHEKTE; -.
DR OrthoDB; 692491at2759; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q058G5; baseline and differential.
DR GO; GO:0005634; C:nucleus; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR GO; GO:0006302; P:double-strand break repair; IEA:InterPro.
DR Gene3D; 1.20.5.370; -; 1.
DR InterPro; IPR010585; DNA_repair_prot_XRCC4.
DR InterPro; IPR014751; XRCC4-like_C.
DR PANTHER; PTHR28559; DNA REPAIR PROTEIN XRCC4; 1.
DR PANTHER; PTHR28559:SF1; DNA REPAIR PROTEIN XRCC4; 1.
DR Pfam; PF06632; XRCC4; 1.
DR SUPFAM; SSF58022; XRCC4, C-terminal oligomerization domain; 1.
PE 2: Evidence at transcript level;
KW Reference proteome {ECO:0000313|Proteomes:UP000006548}.
FT REGION 65..118
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 65..109
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 118 AA; 13221 MW; 49A38FE185E78A76 CRC64;
MEANIRLSEE VVNKTRSFEK MKSEAERCLA QGEKLCDEKT EFENATYAKF LSVLNAKKAK
LRAVRDKEDS VRAVEEEEST YKAESFESGR SDDEQSGEEA SEKATSSKAR GGKRAARS
//
