ID Q083D0_SHEFN Unreviewed; 639 AA.
AC Q083D0;
DT 31-OCT-2006, integrated into UniProtKB/TrEMBL.
DT 31-OCT-2006, sequence version 1.
DT 01-MAY-2013, entry version 40.
DE SubName: Full=Alpha amylase, catalytic region;
DE Flags: Precursor;
GN OrderedLocusNames=Sfri_1785;
OS Shewanella frigidimarina (strain NCIMB 400).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
OC Shewanellaceae; Shewanella.
OX NCBI_TaxID=318167;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NCIMB 400;
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H.,
RA Pitluck S., Fredrickson J.K., Kolker E., McCuel L.A., DiChristina T.,
RA Nealson K.H., Newman D., Tiedje J.M., Zhou J., Romine M.F.,
RA Culley D.E., Serres M., Chertkov O., Brettin T., Bruce D., Han C.,
RA Tapia R., Gilna P., Schmutz J., Larimer F., Land M., Hauser L.,
RA Kyrpides N., Mikhailova N., Richardson P.;
RT "Complete sequence of Shewanella frigidimarina NCIMB 400.";
RL Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CP000447; ABI71635.1; -; Genomic_DNA.
DR RefSeq; YP_750473.1; NC_008345.1.
DR ProteinModelPortal; Q083D0; -.
DR STRING; 318167.Sfri_1785; -.
DR CAZy; GH13; Glycoside Hydrolase Family 13.
DR EnsemblBacteria; ABI71635; ABI71635; Sfri_1785.
DR GeneID; 4277424; -.
DR KEGG; sfr:Sfri_1785; -.
DR PATRIC; 23497529; VBISheFri14343_1852.
DR eggNOG; COG0366; -.
DR HOGENOM; HOG000292767; -.
DR OMA; WWVEYAG; -.
DR ProtClustDB; CLSK913622; -.
DR BioCyc; SFRI318167:GIXS-1850-MONOMER; -.
DR GO; GO:0003824; F:catalytic activity; IEA:InterPro.
DR GO; GO:0043169; F:cation binding; IEA:InterPro.
DR GO; GO:0005975; P:carbohydrate metabolic process; IEA:InterPro.
DR Gene3D; 2.60.40.10; -; 1.
DR Gene3D; 2.60.40.1180; -; 1.
DR Gene3D; 3.20.20.80; -; 1.
DR InterPro; IPR015171; Cyc-maltodext_N.
DR InterPro; IPR019492; Cyclo-malto-dextrinase_C.
DR InterPro; IPR015902; Glyco_hydro_13.
DR InterPro; IPR013780; Glyco_hydro_13_b.
DR InterPro; IPR006047; Glyco_hydro_13_cat_dom.
DR InterPro; IPR013781; Glyco_hydro_catalytic_dom.
DR InterPro; IPR017853; Glycoside_hydrolase_SF.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR014756; Ig_E-set.
DR PANTHER; PTHR10357; PTHR10357; 1.
DR Pfam; PF00128; Alpha-amylase; 1.
DR Pfam; PF10438; Cyc-maltodext_C; 1.
DR Pfam; PF09087; Cyc-maltodext_N; 1.
DR SUPFAM; SSF51445; Glyco_hydro_cat; 1.
DR SUPFAM; SSF81296; Ig_E-set; 1.
PE 4: Predicted;
KW Complete proteome; Signal.
FT SIGNAL 1 39 Potential.
FT CHAIN 40 639 Potential.
FT /FTId=PRO_5000130736.
SQ SEQUENCE 639 AA; 72307 MW; 324DAA7804023042 CRC64;
MSSHCSHPTP LGQHRISKLA SRLLLGCALS VSAMSVNAAL NVEPMSWWAG MQQPKLQLLI
AGDNIRDTQV KLIKAQGVTL NSVDKTDSNN HLFINLDLSQ AKPQRLTLGL YKGEQLVEQF
DYVLQTRQKG SRDRQGFSNK DVIYLITPDR FVNGNPDNDN HPDMLEKADR SFDGGRHGGD
IMGIRKALPY LHDLGVTQLW INPLLENNQQ KYSYHGYSTT DFYNIDPRFG SNQEYQALVE
EAQTFGIGII QDVVVNHMGS GHKWMSSMPS NTWINGQSRW VNDPTDVSYS SHRRTTVQDP
YSVNADTVDF SDGWFDVTMP DLNQRDPHMA TYLIQNSIWW VEYAGLSGIR EDTYSYADKD
FLTAWSKAIM DEYPHFNIVG EEWSSNPVTV SYWQAGKKNA DGYQSFAPSM MDFPLYDTLI
ASLTKEEDWG AGFIDLYQML ANDVVYANPS QLVLFEGNHD TNRIYSLMKN DIELYKMAMA
YVLTSNRIPQ IFYGSEIVMQ SPTEDRNDGA VRADFPGGWP QDSVNVFTGK GLNAQQTEAL
TFVRTLLNYR KNSLAIQQGK LQHFVPKDGV YVQSRHQGDE TLLIIYNKNS HAIELDLQRF
KPAINHNTAG VDIINKQTYS LSKPLTLSNK GVTILKLNR
//