ID Q087D3_SHEFN Unreviewed; 299 AA.
AC Q087D3;
DT 31-OCT-2006, integrated into UniProtKB/TrEMBL.
DT 31-OCT-2006, sequence version 1.
DT 27-MAR-2024, entry version 92.
DE SubName: Full=Transcriptional regulator, LysR family protein {ECO:0000313|EMBL:ABI70632.1};
GN OrderedLocusNames=Sfri_0776 {ECO:0000313|EMBL:ABI70632.1};
OS Shewanella frigidimarina (strain NCIMB 400).
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales;
OC Shewanellaceae; Shewanella.
OX NCBI_TaxID=318167 {ECO:0000313|EMBL:ABI70632.1, ECO:0000313|Proteomes:UP000000684};
RN [1] {ECO:0000313|EMBL:ABI70632.1, ECO:0000313|Proteomes:UP000000684}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NCIMB 400 {ECO:0000313|EMBL:ABI70632.1,
RC ECO:0000313|Proteomes:UP000000684};
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S.,
RA Fredrickson J.K., Kolker E., McCuel L.A., DiChristina T., Nealson K.H.,
RA Newman D., Tiedje J.M., Zhou J., Romine M.F., Culley D.E., Serres M.,
RA Chertkov O., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J.,
RA Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Richardson P.;
RT "Complete sequence of Shewanella frigidimarina NCIMB 400.";
RL Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the LysR transcriptional regulatory family.
CC {ECO:0000256|ARBA:ARBA00009437}.
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DR EMBL; CP000447; ABI70632.1; -; Genomic_DNA.
DR RefSeq; WP_011636255.1; NC_008345.1.
DR AlphaFoldDB; Q087D3; -.
DR STRING; 318167.Sfri_0776; -.
DR KEGG; sfr:Sfri_0776; -.
DR eggNOG; COG0583; Bacteria.
DR HOGENOM; CLU_039613_16_2_6; -.
DR OrthoDB; 9786526at2; -.
DR Proteomes; UP000000684; Chromosome.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR CDD; cd08422; PBP2_CrgA_like; 1.
DR Gene3D; 3.40.190.290; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR005119; LysR_subst-bd.
DR InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR30537; HTH-TYPE TRANSCRIPTIONAL REGULATOR; 1.
DR PANTHER; PTHR30537:SF77; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF00126; HTH_1; 1.
DR Pfam; PF03466; LysR_substrate; 1.
DR SUPFAM; SSF53850; Periplasmic binding protein-like II; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS50931; HTH_LYSR; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000000684}.
FT DOMAIN 1..59
FT /note="HTH lysR-type"
FT /evidence="ECO:0000259|PROSITE:PS50931"
SQ SEQUENCE 299 AA; 33560 MW; 150A2C19B1686294 CRC64;
MDKISAIRSF VEVASCGSFT QAAEQLGLSR LQVSRHIKEV EQWLALRLLH RTTRRVSLTL
QGEEALNYCQ RILSEVTAME SRANSHNNEL VGSIRIASPI GLGQHKLYDV VEAFCQQHPQ
VNIQLLLSDN VSQLVNDRVD IALRYTHQPD ESLIARRLMH IDSVICASPD YLVKHSALLS
ANDLLQHNCL CHSSQPRWEI IDESRTCLLD VSGNLQANDM GVLINAALRG NGIVCLPTDL
ANHYLEQGEL LEVLPNITAP GKTLWAVYLS RSYQQTVVRA FIDFTANAWQ QDIKKWQAS
//
