GenomeNet

Database: UniProt
Entry: Q089X8_SHEFN
LinkDB: Q089X8_SHEFN
Original site: Q089X8_SHEFN 
ID   Q089X8_SHEFN            Unreviewed;       289 AA.
AC   Q089X8;
DT   31-OCT-2006, integrated into UniProtKB/TrEMBL.
DT   31-OCT-2006, sequence version 1.
DT   24-JAN-2024, entry version 101.
DE   SubName: Full=Transcriptional regulator, AraC family {ECO:0000313|EMBL:ABI69937.1};
GN   OrderedLocusNames=Sfri_0074 {ECO:0000313|EMBL:ABI69937.1};
OS   Shewanella frigidimarina (strain NCIMB 400).
OC   Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales;
OC   Shewanellaceae; Shewanella.
OX   NCBI_TaxID=318167 {ECO:0000313|EMBL:ABI69937.1, ECO:0000313|Proteomes:UP000000684};
RN   [1] {ECO:0000313|EMBL:ABI69937.1, ECO:0000313|Proteomes:UP000000684}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=NCIMB 400 {ECO:0000313|EMBL:ABI69937.1,
RC   ECO:0000313|Proteomes:UP000000684};
RG   US DOE Joint Genome Institute;
RA   Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA   Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S.,
RA   Fredrickson J.K., Kolker E., McCuel L.A., DiChristina T., Nealson K.H.,
RA   Newman D., Tiedje J.M., Zhou J., Romine M.F., Culley D.E., Serres M.,
RA   Chertkov O., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J.,
RA   Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Richardson P.;
RT   "Complete sequence of Shewanella frigidimarina NCIMB 400.";
RL   Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; CP000447; ABI69937.1; -; Genomic_DNA.
DR   RefSeq; WP_011635566.1; NC_008345.1.
DR   AlphaFoldDB; Q089X8; -.
DR   STRING; 318167.Sfri_0074; -.
DR   KEGG; sfr:Sfri_0074; -.
DR   eggNOG; COG2207; Bacteria.
DR   HOGENOM; CLU_000445_100_2_6; -.
DR   OMA; MYEPSIC; -.
DR   OrthoDB; 34150at2; -.
DR   Proteomes; UP000000684; Chromosome.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR   Gene3D; 1.10.10.60; Homeodomain-like; 2.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR018060; HTH_AraC.
DR   InterPro; IPR018062; HTH_AraC-typ_CS.
DR   InterPro; IPR020449; Tscrpt_reg_HTH_AraC-type.
DR   InterPro; IPR009594; Tscrpt_reg_HTH_AraC_N.
DR   PANTHER; PTHR43436; ARAC-FAMILY TRANSCRIPTIONAL REGULATOR; 1.
DR   PANTHER; PTHR43436:SF1; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR   Pfam; PF06719; AraC_N; 1.
DR   Pfam; PF12833; HTH_18; 1.
DR   PRINTS; PR00032; HTHARAC.
DR   SMART; SM00342; HTH_ARAC; 1.
DR   SUPFAM; SSF46689; Homeodomain-like; 2.
DR   PROSITE; PS00041; HTH_ARAC_FAMILY_1; 1.
DR   PROSITE; PS01124; HTH_ARAC_FAMILY_2; 1.
PE   4: Predicted;
KW   DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000684}.
FT   DOMAIN          191..289
FT                   /note="HTH araC/xylS-type"
FT                   /evidence="ECO:0000259|PROSITE:PS01124"
SQ   SEQUENCE   289 AA;  32670 MW;  9E137DE4156B6475 CRC64;
     MNEIATLMAQ LAPKEGVNDT HLSGVHVFRS SQYGARGPMC YSQGVLIVGQ GKKRVYLDNQ
     TFEYDRQHSL VMTVPLPVEC ETFASIEEPV LVLMVDIDLV QLNYIIRLMD EHHQIPKDLN
     ESRQSGFFVA DNTEDMDCCV IRLLQALQSP LEAKVMGEAL VLELLYRLLD SPDAAPLYAL
     SLSHTRLSRV EKALNYIHKH YGESVEVDTL ASLVNMSPSA FHRSFKEVTA SSPIQYLKKI
     RLNKAKALLQ LQNLKVKEVS TQVGYESTAQ FSREFKRYFD QSPGECARL
//
DBGET integrated database retrieval system