ID   Q08I82_9POTV            Unreviewed;       487 AA.
AC   Q08I82;
DT   31-OCT-2006, integrated into UniProtKB/TrEMBL.
DT   31-OCT-2006, sequence version 1.
DT   27-MAR-2024, entry version 71.
DE   RecName: Full=Genome polyprotein {ECO:0000256|ARBA:ARBA00020107};
DE   Flags: Fragment;
OS   Amaranthus leaf mottle virus.
OC   Viruses; Riboviria; Orthornavirae; Pisuviricota; Stelpaviricetes;
OC   Patatavirales; Potyviridae; Potyvirus.
OX   NCBI_TaxID=241651 {ECO:0000313|EMBL:CAE30467.1};
RN   [1] {ECO:0000313|EMBL:CAE30467.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=AL {ECO:0000313|EMBL:CAE30467.1};
RX   DOI=10.1007/s10658-006-9064-x;
RA   Segundo E., Lesemann D.E., Martin G., Carmona M.P., Ruiz L., Cuadrado I.M.,
RA   Velasco L., Janssen D.;
RT   "Amaranthus leaf mottle virus: 3'-end RNA sequence proves classification as
RT   distinct virus and reveals affinities within the genus Potyvirus.";
RL   Eur. J. Plant Pathol. 117:81-87(2007).
CC   -!- FUNCTION: Involved in aphid transmission, cell-to-cell and systemis
CC       movement, encapsidation of the viral RNA and in the regulation of viral
CC       RNA amplification. {ECO:0000256|ARBA:ARBA00029405}.
CC   -!- SUBCELLULAR LOCATION: Virion {ECO:0000256|ARBA:ARBA00004328}.
CC   -!- SIMILARITY: Belongs to the potyviridae genome polyprotein family.
CC       {ECO:0000256|ARBA:ARBA00006064, ECO:0000256|RuleBase:RU003351}.
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DR   EMBL; AJ580021; CAE30467.1; -; Genomic_RNA.
DR   GO; GO:0019028; C:viral capsid; IEA:UniProtKB-KW.
DR   GO; GO:0000166; F:nucleotide binding; IEA:UniProtKB-KW.
DR   GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR   GO; GO:0003968; F:RNA-dependent RNA polymerase activity; IEA:UniProtKB-KW.
DR   GO; GO:0006351; P:DNA-templated transcription; IEA:InterPro.
DR   GO; GO:0039694; P:viral RNA genome replication; IEA:InterPro.
DR   Gene3D; 3.30.70.270; -; 1.
DR   InterPro; IPR043502; DNA/RNA_pol_sf.
DR   InterPro; IPR001592; Poty_coat.
DR   InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR   InterPro; IPR001205; RNA-dir_pol_C.
DR   InterPro; IPR007094; RNA-dir_pol_PSvirus.
DR   Pfam; PF00767; Poty_coat; 1.
DR   Pfam; PF00680; RdRP_1; 1.
DR   SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR   PROSITE; PS50507; RDRP_SSRNA_POS; 1.
PE   3: Inferred from homology;
KW   Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW   Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695};
KW   RNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022484};
KW   Transferase {ECO:0000256|ARBA:ARBA00022679};
KW   Viral RNA replication {ECO:0000256|ARBA:ARBA00022953};
KW   Virion {ECO:0000256|ARBA:ARBA00022844}.
FT   DOMAIN          1..53
FT                   /note="RdRp catalytic"
FT                   /evidence="ECO:0000259|PROSITE:PS50507"
FT   REGION          210..261
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        212..254
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   NON_TER         1
FT                   /evidence="ECO:0000313|EMBL:CAE30467.1"
SQ   SEQUENCE   487 AA;  55945 MW;  E8D366FEFA714D9B CRC64;
     STVVDNSLMV VLAMHYALVK ENLPYDEVEN FIKFYVNGDD LIIAVHPSKE SVLDRLADHF
     SSLGLNYDFT SRTRDKSELW FMSHRGIEIE GMYVPKLEEE RIVSILQWDR ATKPEYRLEA
     VCAAMIESWG YPCLTHQIRK FYSWLIEQQP FSELAAEGKA PYIAEMALRR LYLDRAAENS
     ELQDFMKYFT DLDDDMECEQ YEVHHQAGEE MDATQAGSNT QKPKKNAANP QQEDRGNGAG
     SSGSNQQIIS DRDVNAATRG THMVPRIKTI TSKMNFPKAN KKNALNLDHL LEYKPRQIDL
     ANTRATQMQF DTWFNAVQAA YELEENQMPT VMNGLMVWCI ENGTSPNING VWVMMDGEEQ
     VEYPLKPVIE NAKPTFRQIM AHFSDVAEAY IEMRNKTEPY MPRYGLVRNL RDMSLARYAF
     DFYEMTSRTS TRAREAHIQM KAAALKSSQS RLFGLDGGIS TQEENTERHT TEDVTHNMHT
     LLGVRNM
//