GenomeNet

Database: UniProt
Entry: Q0BC53_BURCM
LinkDB: Q0BC53_BURCM
Original site: Q0BC53_BURCM 
ID   Q0BC53_BURCM            Unreviewed;       278 AA.
AC   Q0BC53;
DT   17-OCT-2006, integrated into UniProtKB/TrEMBL.
DT   17-OCT-2006, sequence version 1.
DT   24-JAN-2024, entry version 84.
DE   SubName: Full=Integrase, catalytic region {ECO:0000313|EMBL:ABI88270.1};
GN   OrderedLocusNames=Bamb_0814 {ECO:0000313|EMBL:ABI86373.1}, Bamb_1446
GN   {ECO:0000313|EMBL:ABI87004.1}, Bamb_2564
GN   {ECO:0000313|EMBL:ABI88120.1}, Bamb_2714
GN   {ECO:0000313|EMBL:ABI88270.1};
OS   Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) (Burkholderia cepacia
OS   (strain AMMD)).
OC   Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC   Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.
OX   NCBI_TaxID=339670 {ECO:0000313|EMBL:ABI88270.1, ECO:0000313|Proteomes:UP000000662};
RN   [1] {ECO:0000313|Proteomes:UP000000662}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC BAA-244 / AMMD {ECO:0000313|Proteomes:UP000000662};
RA   Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA   Glavina del Rio T., Hammon N., Israni S., Pitluck S., Bruce D., Chain P.,
RA   Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M.,
RA   Hauser L., Kyrpides N., Kim E., Parke J., Coenye T., Konstantinidis K.,
RA   Ramette A., Tiedje J., Richardson P.;
RT   "Complete sequence of chromosome 1 of Burkholderia cepacia AMMD.";
RL   Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ABI88270.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=AMMD {ECO:0000313|EMBL:ABI88270.1};
RG   US DOE Joint Genome Institute;
RA   Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA   Glavina del Rio T., Hammon N., Israni S., Pitluck S., Bruce D., Chain P.,
RA   Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M.,
RA   Hauser L., Kyrpides N., Kim E., Parke J., Coenye T., Konstantinidis K.,
RA   Ramette A., Tiedje J., Richardson P.;
RT   "Complete sequence of Chromosome 1 of Burkholderia cepacia AMMD.";
RL   Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; CP000440; ABI86373.1; -; Genomic_DNA.
DR   EMBL; CP000440; ABI87004.1; -; Genomic_DNA.
DR   EMBL; CP000440; ABI88120.1; -; Genomic_DNA.
DR   EMBL; CP000440; ABI88270.1; -; Genomic_DNA.
DR   AlphaFoldDB; Q0BC53; -.
DR   KEGG; bam:Bamb_0814; -.
DR   KEGG; bam:Bamb_1446; -.
DR   KEGG; bam:Bamb_2564; -.
DR   KEGG; bam:Bamb_2714; -.
DR   eggNOG; COG2801; Bacteria.
DR   OMA; RIMREDN; -.
DR   Proteomes; UP000000662; Chromosome 1.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR   Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR   InterPro; IPR025948; HTH-like_dom.
DR   InterPro; IPR001584; Integrase_cat-core.
DR   InterPro; IPR012337; RNaseH-like_sf.
DR   InterPro; IPR036397; RNaseH_sf.
DR   InterPro; IPR048020; Transpos_IS3.
DR   NCBIfam; NF033516; transpos_IS3; 1.
DR   PANTHER; PTHR46889:SF1; TRANSPOSASE FOR INSERTION SEQUENCE ELEMENT IS904-RELATED; 1.
DR   PANTHER; PTHR46889; TRANSPOSASE INSF FOR INSERTION SEQUENCE IS3B-RELATED; 1.
DR   Pfam; PF13276; HTH_21; 1.
DR   Pfam; PF00665; rve; 1.
DR   Pfam; PF13333; rve_2; 1.
DR   SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR   PROSITE; PS50994; INTEGRASE; 1.
PE   4: Predicted;
FT   DOMAIN          102..276
FT                   /note="Integrase catalytic"
FT                   /evidence="ECO:0000259|PROSITE:PS50994"
SQ   SEQUENCE   278 AA;  32410 MW;  3B5893419FF28A89 CRC64;
     MHELRQHHPV AALLKAAGLA RSTFYYQLGT LSVDDRRADL KAKIRAVFDH HKGRYGYRRV
     TAAIRQTGHL VNHKAVQRLM QQLQLKSLLR PKKYRSWRGE VGKAAPNLLQ RQFSAAQANQ
     KWVTDVTEFN VGGQKLYLSP VMDLYNGEIV AYQMDRRPSF ELVSGMLKKA LTKLKRTDRP
     LLHSDQGWQY RMPAFRRQLK RRKLTQSMSR KGNCLDNAAM ESFFGTLKSE CYKGHRFTCV
     EHLRDTLNHY IHYYNHERIK LKLKGLSPVQ YRTQPLSA
//
DBGET integrated database retrieval system