ID Q0BC53_BURCM Unreviewed; 278 AA.
AC Q0BC53;
DT 17-OCT-2006, integrated into UniProtKB/TrEMBL.
DT 17-OCT-2006, sequence version 1.
DT 24-JAN-2024, entry version 84.
DE SubName: Full=Integrase, catalytic region {ECO:0000313|EMBL:ABI88270.1};
GN OrderedLocusNames=Bamb_0814 {ECO:0000313|EMBL:ABI86373.1}, Bamb_1446
GN {ECO:0000313|EMBL:ABI87004.1}, Bamb_2564
GN {ECO:0000313|EMBL:ABI88120.1}, Bamb_2714
GN {ECO:0000313|EMBL:ABI88270.1};
OS Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) (Burkholderia cepacia
OS (strain AMMD)).
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.
OX NCBI_TaxID=339670 {ECO:0000313|EMBL:ABI88270.1, ECO:0000313|Proteomes:UP000000662};
RN [1] {ECO:0000313|Proteomes:UP000000662}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-244 / AMMD {ECO:0000313|Proteomes:UP000000662};
RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA Glavina del Rio T., Hammon N., Israni S., Pitluck S., Bruce D., Chain P.,
RA Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M.,
RA Hauser L., Kyrpides N., Kim E., Parke J., Coenye T., Konstantinidis K.,
RA Ramette A., Tiedje J., Richardson P.;
RT "Complete sequence of chromosome 1 of Burkholderia cepacia AMMD.";
RL Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:ABI88270.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=AMMD {ECO:0000313|EMBL:ABI88270.1};
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA Glavina del Rio T., Hammon N., Israni S., Pitluck S., Bruce D., Chain P.,
RA Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M.,
RA Hauser L., Kyrpides N., Kim E., Parke J., Coenye T., Konstantinidis K.,
RA Ramette A., Tiedje J., Richardson P.;
RT "Complete sequence of Chromosome 1 of Burkholderia cepacia AMMD.";
RL Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CP000440; ABI86373.1; -; Genomic_DNA.
DR EMBL; CP000440; ABI87004.1; -; Genomic_DNA.
DR EMBL; CP000440; ABI88120.1; -; Genomic_DNA.
DR EMBL; CP000440; ABI88270.1; -; Genomic_DNA.
DR AlphaFoldDB; Q0BC53; -.
DR KEGG; bam:Bamb_0814; -.
DR KEGG; bam:Bamb_1446; -.
DR KEGG; bam:Bamb_2564; -.
DR KEGG; bam:Bamb_2714; -.
DR eggNOG; COG2801; Bacteria.
DR OMA; RIMREDN; -.
DR Proteomes; UP000000662; Chromosome 1.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR025948; HTH-like_dom.
DR InterPro; IPR001584; Integrase_cat-core.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR048020; Transpos_IS3.
DR NCBIfam; NF033516; transpos_IS3; 1.
DR PANTHER; PTHR46889:SF1; TRANSPOSASE FOR INSERTION SEQUENCE ELEMENT IS904-RELATED; 1.
DR PANTHER; PTHR46889; TRANSPOSASE INSF FOR INSERTION SEQUENCE IS3B-RELATED; 1.
DR Pfam; PF13276; HTH_21; 1.
DR Pfam; PF00665; rve; 1.
DR Pfam; PF13333; rve_2; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50994; INTEGRASE; 1.
PE 4: Predicted;
FT DOMAIN 102..276
FT /note="Integrase catalytic"
FT /evidence="ECO:0000259|PROSITE:PS50994"
SQ SEQUENCE 278 AA; 32410 MW; 3B5893419FF28A89 CRC64;
MHELRQHHPV AALLKAAGLA RSTFYYQLGT LSVDDRRADL KAKIRAVFDH HKGRYGYRRV
TAAIRQTGHL VNHKAVQRLM QQLQLKSLLR PKKYRSWRGE VGKAAPNLLQ RQFSAAQANQ
KWVTDVTEFN VGGQKLYLSP VMDLYNGEIV AYQMDRRPSF ELVSGMLKKA LTKLKRTDRP
LLHSDQGWQY RMPAFRRQLK RRKLTQSMSR KGNCLDNAAM ESFFGTLKSE CYKGHRFTCV
EHLRDTLNHY IHYYNHERIK LKLKGLSPVQ YRTQPLSA
//