ID Q0C066_HYPNA Unreviewed; 276 AA.
AC Q0C066;
DT 17-OCT-2006, integrated into UniProtKB/TrEMBL.
DT 17-OCT-2006, sequence version 1.
DT 24-JAN-2024, entry version 111.
DE SubName: Full=SIS domain protein {ECO:0000313|EMBL:ABI76544.1};
GN OrderedLocusNames=HNE_2181 {ECO:0000313|EMBL:ABI76544.1};
OS Hyphomonas neptunium (strain ATCC 15444).
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomonadales;
OC Hyphomonadaceae; Hyphomonas.
OX NCBI_TaxID=228405 {ECO:0000313|EMBL:ABI76544.1, ECO:0000313|Proteomes:UP000001959};
RN [1] {ECO:0000313|EMBL:ABI76544.1, ECO:0000313|Proteomes:UP000001959}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 15444 {ECO:0000313|EMBL:ABI76544.1,
RC ECO:0000313|Proteomes:UP000001959};
RX PubMed=16980487; DOI=10.1128/JB.00111-06;
RA Badger J.H., Hoover T.R., Brun Y.V., Weiner R.M., Laub M.T., Alexandre G.,
RA Mrazek J., Ren Q., Paulsen I.T., Nelson K.E., Khouri H.M., Radune D.,
RA Sosa J., Dodson R.J., Sullivan S.A., Rosovitz M.J., Madupu R.,
RA Brinkac L.M., Durkin A.S., Daugherty S.C., Kothari S.P., Giglio M.G.,
RA Zhou L., Haft D.H., Selengut J.D., Davidsen T.M., Yang Q., Zafar N.,
RA Ward N.L.;
RT "Comparative genomic evidence for a close relationship between the
RT dimorphic prosthecate bacteria Hyphomonas neptunium and Caulobacter
RT crescentus.";
RL J. Bacteriol. 188:6841-6850(2006).
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DR EMBL; CP000158; ABI76544.1; -; Genomic_DNA.
DR RefSeq; WP_011647175.1; NC_008358.1.
DR AlphaFoldDB; Q0C066; -.
DR STRING; 228405.HNE_2181; -.
DR KEGG; hne:HNE_2181; -.
DR eggNOG; COG1737; Bacteria.
DR HOGENOM; CLU_055769_1_3_5; -.
DR OMA; WFEVAEA; -.
DR Proteomes; UP000001959; Chromosome.
DR GO; GO:0097367; F:carbohydrate derivative binding; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:1901135; P:carbohydrate derivative metabolic process; IEA:InterPro.
DR CDD; cd05013; SIS_RpiR; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR000281; HTH_RpiR.
DR InterPro; IPR047640; RpiR-like.
DR InterPro; IPR035472; RpiR-like_SIS.
DR InterPro; IPR001347; SIS_dom.
DR InterPro; IPR046348; SIS_dom_sf.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR PANTHER; PTHR30514; GLUCOKINASE; 1.
DR PANTHER; PTHR30514:SF20; TRANSCRIPTIONAL REGULATOR-RELATED; 1.
DR Pfam; PF01418; HTH_6; 1.
DR Pfam; PF01380; SIS; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF53697; SIS domain; 1.
DR PROSITE; PS51071; HTH_RPIR; 1.
DR PROSITE; PS51464; SIS; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000001959}.
FT DOMAIN 7..83
FT /note="HTH rpiR-type"
FT /evidence="ECO:0000259|PROSITE:PS51071"
FT DOMAIN 138..276
FT /note="SIS"
FT /evidence="ECO:0000259|PROSITE:PS51464"
SQ SEQUENCE 276 AA; 30168 MW; AA975AF2FE29AA2F CRC64;
MPASNADELR LQIKREYEGF SKQLRIVAQY ILDHPNEIGL ETVTVVAERM GVQPSTVVRL
AKVLGFDGAS QLQKLFKDEV VNSAGALGYK ERIRRYKAPA SNAKSNHVSS VLDEALECGI
LGLEDLRHSM NASEIATAVK LIQTASTIYV AGFQRSFPVA AYLSYALQRL RKNTIFIDGT
GGLYEHQISF ANKDDLLIAI GFNPYSDQIV ATLDQAKRNK LKIVGISDSH VSPVVSGAHA
PFIVHDPVVR GFRTLTSSMT LAQAIVLAYA FSDTKA
//