ID Q0EDX8_PSESF Unreviewed; 76 AA.
AC Q0EDX8;
DT 17-OCT-2006, integrated into UniProtKB/TrEMBL.
DT 17-OCT-2006, sequence version 1.
DT 27-MAR-2024, entry version 52.
DE SubName: Full=RtrR protein {ECO:0000313|EMBL:BAF32856.1};
DE SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:GBH12979.1};
GN Name=txi34 {ECO:0000313|EMBL:BAF32856.1};
GN ORFNames=KPSA1_06457 {ECO:0000313|EMBL:GBH12979.1};
OS Pseudomonas syringae pv. actinidiae.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
OC Pseudomonadaceae; Pseudomonas; Pseudomonas syringae.
OX NCBI_TaxID=103796 {ECO:0000313|EMBL:BAF32856.1};
RN [1] {ECO:0000313|EMBL:BAF32856.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=KW-11 {ECO:0000313|EMBL:BAF32856.1};
RX PubMed=8979356;
RA Sawada H., Takeuchi T., Matsuda I.;
RT "Comparative analysis of Pseudomonas syringae pv. actinidiae and pv.
RT phaseolicola based on phaseolotoxin-resistant ornithine
RT carbamoyltransferase gene (argK) and 16S-23S rRNA intergenic spacer
RT sequences.";
RL Appl. Environ. Microbiol. 63:282-288(1997).
RN [2] {ECO:0000313|EMBL:BAF32856.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=KW-11 {ECO:0000313|EMBL:BAF32856.1};
RX PubMed=10552044; DOI=.1007/PL00006584;
RA Sawada H., Suzuki F., Matsuda I., Saitou N.;
RT "Phylogenetic analysis of Pseudomonas syringae pathovars suggests the
RT horizontal gene transfer of argK and the evolutionary stability of hrp gene
RT cluster.";
RL J. Mol. Evol. 49:627-644(1999).
RN [3] {ECO:0000313|EMBL:BAF32856.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=KW-11 {ECO:0000313|EMBL:BAF32856.1};
RX PubMed=11956683; DOI=.1007/s00239-001-0032-y;
RA Sawada H., Kanaya S., Tsuda M., Suzuki F., Azegami K., Saitou N.;
RT "A phylogenomic study of the OCTase genes in Pseudomonas syringae
RT pathovars: the horizontal transfer of the argK-tox cluster and the
RT evolutionary history of OCTase genes on their genomes.";
RL J. Mol. Evol. 54:437-457(2002).
RN [4] {ECO:0000313|EMBL:BAF32856.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=KW-11 {ECO:0000313|EMBL:BAF32856.1};
RX PubMed=16927007; DOI=.1007/s00239-005-0271-4;
RA Genka H., Baba T., Tsuda M., Kanaya S., Mori H., Yoshida T., Noguchi M.T.,
RA Tsuchiya K., Sawada H.;
RT "Comparative analysis of argK-tox clusters and their flanking regions in
RT phaseolotoxin-producing Pseudomonas syringae pathovars.";
RL J. Mol. Evol. 63:401-414(2006).
RN [5] {ECO:0000313|EMBL:GBH12979.1, ECO:0000313|Proteomes:UP000247480}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MAFF212206 {ECO:0000313|EMBL:GBH12979.1,
RC ECO:0000313|Proteomes:UP000247480};
RA Tabuchi M., Saito M., Fujiwara S., Sasa N., Akimitsu K., Gomi K.,
RA Konishi-Sugita S., Hamano K., Kataoka I.;
RT "Draft genome sequence of Pseudomonas syringae pv. actinidiae biovar 1
RT strains isolated from kiwifruit in Kagawa prefecture.";
RL Submitted (APR-2018) to the EMBL/GenBank/DDBJ databases.
RN [6] {ECO:0000313|EMBL:BAF32856.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=KW-11 {ECO:0000313|EMBL:BAF32856.1};
RA Sawada H., Fujikawa T.;
RT "Genetic diversity of Pseudomonas syringae pv. actinidiae, pathogen of
RT kiwifruit bacterial canker.";
RL Plant Pathol. 68:1235-1248(2019).
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DR EMBL; AB237163; BAF32856.1; -; Genomic_DNA.
DR EMBL; BGJZ01000336; GBH12979.1; -; Genomic_DNA.
DR RefSeq; WP_003381724.1; NZ_RBSR01000014.1.
DR AlphaFoldDB; Q0EDX8; -.
DR Proteomes; UP000247480; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR CDD; cd00093; HTH_XRE; 1.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR001387; Cro/C1-type_HTH.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR PANTHER; PTHR46797; HTH-TYPE TRANSCRIPTIONAL REGULATOR; 1.
DR Pfam; PF01381; HTH_3; 1.
DR SMART; SM00530; HTH_XRE; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR PROSITE; PS50943; HTH_CROC1; 1.
PE 4: Predicted;
FT DOMAIN 12..66
FT /note="HTH cro/C1-type"
FT /evidence="ECO:0000259|PROSITE:PS50943"
SQ SEQUENCE 76 AA; 8385 MW; B461202D055702C2 CRC64;
MDKLAKALGR RIRTQRKACQ ISQDALALAC NIDRSYMGRI ERGEVNITVE KLYRIAGVLA
CDPSGLLPQV SELQPA
//
