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Database: UniProt
Entry: Q0I5B8
LinkDB: Q0I5B8
Original site: Q0I5B8 
ID   RPOC_HISS1              Reviewed;        1420 AA.
AC   Q0I5B8;
DT   04-NOV-2008, integrated into UniProtKB/Swiss-Prot.
DT   03-OCT-2006, sequence version 1.
DT   14-MAY-2014, entry version 59.
DE   RecName: Full=DNA-directed RNA polymerase subunit beta';
DE            Short=RNAP subunit beta';
DE            EC=2.7.7.6;
DE   AltName: Full=RNA polymerase subunit beta';
DE   AltName: Full=Transcriptase subunit beta';
GN   Name=rpoC; OrderedLocusNames=HS_1564;
OS   Histophilus somni (strain 129Pt) (Haemophilus somnus).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales;
OC   Pasteurellaceae; Histophilus.
OX   NCBI_TaxID=205914;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=129Pt;
RX   PubMed=17172329; DOI=10.1128/JB.01422-06;
RA   Challacombe J.F., Duncan A.J., Brettin T.S., Bruce D., Chertkov O.,
RA   Detter J.C., Han C.S., Misra M., Richardson P., Tapia R., Thayer N.,
RA   Xie G., Inzana T.J.;
RT   "Complete genome sequence of Haemophilus somnus (Histophilus somni)
RT   strain 129Pt and comparison to Haemophilus ducreyi 35000HP and
RT   Haemophilus influenzae Rd.";
RL   J. Bacteriol. 189:1890-1898(2007).
CC   -!- FUNCTION: DNA-dependent RNA polymerase catalyzes the transcription
CC       of DNA into RNA using the four ribonucleoside triphosphates as
CC       substrates (By similarity).
CC   -!- CATALYTIC ACTIVITY: Nucleoside triphosphate + RNA(n) = diphosphate
CC       + RNA(n+1).
CC   -!- SUBUNIT: The RNAP catalytic core consists of 2 alpha, 1 beta, 1
CC       beta' and 1 omega subunit. When a sigma factor is associated with
CC       the core the holoenzyme is formed, which can initiate
CC       transcription (By similarity).
CC   -!- SIMILARITY: Belongs to the RNA polymerase beta' chain family.
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DR   EMBL; CP000436; ABI25832.1; -; Genomic_DNA.
DR   RefSeq; YP_719769.1; NC_008309.1.
DR   ProteinModelPortal; Q0I5B8; -.
DR   SMR; Q0I5B8; 909-943, 945-1129.
DR   STRING; 205914.HS_1564; -.
DR   PRIDE; Q0I5B8; -.
DR   EnsemblBacteria; ABI25832; ABI25832; HS_1564.
DR   GeneID; 4241085; -.
DR   KEGG; hso:HS_1564; -.
DR   PATRIC; 20283269; VBIHaeSom53361_1641.
DR   eggNOG; COG0086; -.
DR   HOGENOM; HOG000218386; -.
DR   KO; K03046; -.
DR   OrthoDB; EOG6M9DS6; -.
DR   BioCyc; HSOM205914:GJ7V-1635-MONOMER; -.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-HAMAP.
DR   GO; GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-HAMAP.
DR   GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-HAMAP.
DR   HAMAP; MF_01322; RNApol_bact_RpoC; 1.
DR   HAMAP; MF_01323; RNApol_bact_RpoC1; 1.
DR   InterPro; IPR012754; DNA-dir_RpoC_beta_prime.
DR   InterPro; IPR000722; RNA_pol_asu.
DR   InterPro; IPR006592; RNA_pol_N.
DR   InterPro; IPR007080; RNA_pol_Rpb1_1.
DR   InterPro; IPR007066; RNA_pol_Rpb1_3.
DR   InterPro; IPR007083; RNA_pol_Rpb1_4.
DR   InterPro; IPR007081; RNA_pol_Rpb1_5.
DR   Pfam; PF04997; RNA_pol_Rpb1_1; 1.
DR   Pfam; PF00623; RNA_pol_Rpb1_2; 1.
DR   Pfam; PF04983; RNA_pol_Rpb1_3; 1.
DR   Pfam; PF05000; RNA_pol_Rpb1_4; 1.
DR   Pfam; PF04998; RNA_pol_Rpb1_5; 1.
DR   SMART; SM00663; RPOLA_N; 1.
DR   TIGRFAMs; TIGR02386; rpoC_TIGR; 1.
PE   3: Inferred from homology;
KW   Complete proteome; DNA-directed RNA polymerase;
KW   Nucleotidyltransferase; Transcription; Transferase.
FT   CHAIN         1   1420       DNA-directed RNA polymerase subunit
FT                                beta'.
FT                                /FTId=PRO_0000353379.
SQ   SEQUENCE   1420 AA;  157931 MW;  6235D87B847E1FFB CRC64;
     MKDLVKFLKA QSKTSEDFDV IKIGLASPDM IRSWSYGEVK KPETINYRTF KPERDGLFCA
     RIFGPVKDYE CLCGKYKRLK HRGVICEKCG VEVTQAKVRR ERMGHIELAS PVAHIWFLKS
     LPSRIGLLLD MPLRDIERVL YFESYIVIEP GMTDLERGQL LTEEQFLDAE DRWQDEFDAK
     MGAEAIQALL RDMDLEVECE TLREELQSTN SETKRKKITK RLKLLESFIQ SGNKPEWMVM
     TVLPVLPPDL RPLVPLDGGR FATSDLNDLY RRVINRNNRL KRLLDLIAPD IIVRNEKRML
     QESVDALLDN GRRGRAITGS NRRPLKSLAD MIKGKQGRFR QNLLGKRVDY SGRSVITVGP
     YLHLHQCGLP KKMALELFRP FIYAKLESRG FATTIKAAKK MVEREDAIVW DILADVIREH
     PILLNRAPTL HRLGIQAFEP ILIEGKAIQL HPLVCAAFNA DFDGDQMAVH VPLTLEAQLE
     ARALMMSTNN ILSPANGEPI IVPSQDVVLG LYYMTRDKVN GKGEGMLLQD SREAEKAYRT
     GQAELHSRVK VRITEYVKNA IGEFEPQTHL VDTTIGRAIL WMIAPKGMPF SLFNQTLGKK
     AISKLINESY RRLGLKESVL FADHIMYTGF AYAARSGSSV GIDDMVIPQK KYEIISAAEE
     EVAEIQEQFQ SGLVTAGERY NKVIDIWAAA NERVAKAMME NLSQEEVINR EGQPEKQASF
     NSIFMMADSG ARGSAAQIRQ LAGMRGLMAR PDGSIIETPI TANFREGLNV LQYFISTHGA
     RKGLADTALK TANSGYLTRR LVDVAQDLVI IEDDCGTHEG IVMTPLIEGG DVKEALRDRV
     LGRVAAEDIL KPGTNEVLIS RNTLLDEKLC DVIDENSVDS IKVRSVVTCD TDFGVCAKCY
     GRDLARGHLI NQGEAVGVIA AQSIGEPGTQ LTMRTFHIGG AASAAAKESS VQVKNTGTLR
     LTNVKFVTNK EGKLVLTSRN TELTIIDTFG RTKEHYKVPY GAVLNHADGE EVTAGETVAN
     WDPHTMPVIS EVSGFVKFVE IVDGLTVTRQ TDELTGLSSI VVQDVGERAT AGKDLRPALK
     LVDAQGNDIF IPGTDVMAQY FLPGKAIVTL DDGAEVFVGE PLARIPQESV GTKDITGGLP
     RVADLFEARK PKEPAILAEI SGIVSFGKET KGKRRLLITP MEGETYEEMI PKWRQLNVFE
     GELVQRGDLI SDGAETPHDI LRLRGVHAVT DYIVNEVQEV YRLQGVKIND KHIEVIVRQM
     LRKAIITNAY DSEFLEGEQV EVARVKIVNR KRAEEGKPLV EFERELLGIT KASLATESFI
     SAASFQETTR VLTEAAVAGK RDELRGLKEN VIVGRLIPAG TGFAYHQNRQ KNRLVGGMEN
     TTEVKLSAVD EEEIASEFTF SAEDATANLA EMLNMADDAE
//
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