ID RL1_CLOPS Reviewed; 229 AA.
AC Q0SQD3;
DT 23-OCT-2007, integrated into UniProtKB/Swiss-Prot.
DT 05-SEP-2006, sequence version 1.
DT 01-MAY-2013, entry version 51.
DE RecName: Full=50S ribosomal protein L1;
GN Name=rplA; OrderedLocusNames=CPR_2411;
OS Clostridium perfringens (strain SM101 / Type A).
OC Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
OC Clostridium.
OX NCBI_TaxID=289380;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SM101 / Type A;
RX PubMed=16825665; DOI=10.1101/gr.5238106;
RA Myers G.S.A., Rasko D.A., Cheung J.K., Ravel J., Seshadri R.,
RA DeBoy R.T., Ren Q., Varga J., Awad M.M., Brinkac L.M., Daugherty S.C.,
RA Haft D.H., Dodson R.J., Madupu R., Nelson W.C., Rosovitz M.J.,
RA Sullivan S.A., Khouri H., Dimitrov G.I., Watkins K.L., Mulligan S.,
RA Benton J., Radune D., Fisher D.J., Atkins H.S., Hiscox T., Jost B.H.,
RA Billington S.J., Songer J.G., McClane B.A., Titball R.W., Rood J.I.,
RA Melville S.B., Paulsen I.T.;
RT "Skewed genomic variability in strains of the toxigenic bacterial
RT pathogen, Clostridium perfringens.";
RL Genome Res. 16:1031-1040(2006).
CC -!- FUNCTION: Binds directly to 23S rRNA. The L1 stalk is quite mobile
CC in the ribosome, and is involved in E site tRNA release (By
CC similarity).
CC -!- FUNCTION: Protein L1 is also a translational repressor protein, it
CC controls the translation of the L11 operon by binding to its mRNA
CC (By similarity).
CC -!- SUBUNIT: Part of the 50S ribosomal subunit (By similarity).
CC -!- SIMILARITY: Belongs to the ribosomal protein L1P family.
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DR EMBL; CP000312; ABG85837.1; -; Genomic_DNA.
DR RefSeq; YP_699674.1; NC_008262.1.
DR ProteinModelPortal; Q0SQD3; -.
DR SMR; Q0SQD3; 3-225.
DR STRING; 289380.CPR_2411; -.
DR EnsemblBacteria; ABG85837; ABG85837; CPR_2411.
DR GeneID; 4204936; -.
DR KEGG; cpr:CPR_2411; -.
DR PATRIC; 19493132; VBICloPer122123_2344.
DR eggNOG; COG0081; -.
DR HOGENOM; HOG000207015; -.
DR KO; K02863; -.
DR OMA; AKGRYVK; -.
DR ProtClustDB; PRK05424; -.
DR BioCyc; CPER289380:GI76-2496-MONOMER; -.
DR GO; GO:0015934; C:large ribosomal subunit; IEA:InterPro.
DR GO; GO:0019843; F:rRNA binding; IEA:HAMAP.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0000049; F:tRNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
DR GO; GO:0006412; P:translation; IEA:HAMAP.
DR Gene3D; 3.30.190.20; -; 2.
DR Gene3D; 3.40.50.790; -; 1.
DR HAMAP; MF_01318_B; Ribosomal_L1_B; 1; -.
DR InterPro; IPR005878; Ribosom_L1_bac-type.
DR InterPro; IPR002143; Ribosomal_L1.
DR InterPro; IPR016094; Ribosomal_L1_2-a/b-sand.
DR InterPro; IPR016095; Ribosomal_L1_3-a/b-sand.
DR InterPro; IPR023673; Ribosomal_L1_CS.
DR InterPro; IPR023674; Ribosomal_L1_SF.
DR Pfam; PF00687; Ribosomal_L1; 1.
DR PIRSF; PIRSF002155; Ribosomal_L1; 1.
DR SUPFAM; SSF56808; Ribosomal_L1; 1.
DR TIGRFAMs; TIGR01169; rplA_bact; 1.
DR PROSITE; PS01199; RIBOSOMAL_L1; 1.
PE 3: Inferred from homology;
KW Complete proteome; Repressor; Ribonucleoprotein; Ribosomal protein;
KW RNA-binding; rRNA-binding; Translation regulation; tRNA-binding.
FT CHAIN 1 229 50S ribosomal protein L1.
FT /FTId=PRO_0000307995.
SQ SEQUENCE 229 AA; 24440 MW; 800B90F124C35C21 CRC64;
MGKKYIESSK LIDKNALYTP AEALELAVKT AKAKFDETIE LHVRLGVDPR HADQQVRGAV
VLPHGTGKDV KVLVFAKGEK AKEAEAAGAD FVGADELVQK IQGENWFDYD VVVATPDMMG
VVGRLGRVLG PKGLMPNPKS GTVTFDVANA IKEIKAGKVE YRVDKTAIVH CPIGKKSFGT
EKLVENFKAL MDALVKAKPA AAKGQYLKSV SVSATMGPGA KVNPAKVLD
//
