ID   Q12JD5_SHEDO            Unreviewed;       850 AA.
AC   Q12JD5;
DT   22-AUG-2006, integrated into UniProtKB/TrEMBL.
DT   22-AUG-2006, sequence version 1.
DT   27-MAR-2024, entry version 103.
DE   SubName: Full=ATP-dependent helicase HrpB {ECO:0000313|EMBL:ABE56441.1};
GN   OrderedLocusNames=Sden_3165 {ECO:0000313|EMBL:ABE56441.1};
OS   Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013).
OC   Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales;
OC   Shewanellaceae; Shewanella.
OX   NCBI_TaxID=318161 {ECO:0000313|EMBL:ABE56441.1, ECO:0000313|Proteomes:UP000001982};
RN   [1] {ECO:0000313|EMBL:ABE56441.1, ECO:0000313|Proteomes:UP000001982}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=OS217 / ATCC BAA-1090 / DSM 15013
RC   {ECO:0000313|Proteomes:UP000001982};
RG   US DOE Joint Genome Institute;
RA   Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA   Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S.,
RA   Brettin T., Bruce D., Han C., Tapia R., Gilna P., Kiss H., Schmutz J.,
RA   Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A., Richardson P.;
RT   "Complete sequence of Shewanella denitrificans OS217.";
RL   Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; CP000302; ABE56441.1; -; Genomic_DNA.
DR   RefSeq; WP_011497586.1; NC_007954.1.
DR   AlphaFoldDB; Q12JD5; -.
DR   STRING; 318161.Sden_3165; -.
DR   KEGG; sdn:Sden_3165; -.
DR   eggNOG; COG1643; Bacteria.
DR   HOGENOM; CLU_001832_5_6_6; -.
DR   OrthoDB; 9805617at2; -.
DR   Proteomes; UP000001982; Chromosome.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
DR   GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   CDD; cd17990; DEXHc_HrpB; 1.
DR   CDD; cd18791; SF2_C_RHA; 1.
DR   Gene3D; 1.20.120.1080; -; 1.
DR   Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR   InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR   InterPro; IPR007502; Helicase-assoc_dom.
DR   InterPro; IPR014001; Helicase_ATP-bd.
DR   InterPro; IPR001650; Helicase_C.
DR   InterPro; IPR010225; HrpB.
DR   InterPro; IPR049614; HrpB_DEXH.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR013689; RNA_helicase_ATP-dep_HrpB_C.
DR   NCBIfam; TIGR01970; DEAH_box_HrpB; 1.
DR   PANTHER; PTHR43519; ATP-DEPENDENT RNA HELICASE HRPB; 1.
DR   PANTHER; PTHR43519:SF1; ATP-DEPENDENT RNA HELICASE HRPB; 1.
DR   Pfam; PF00270; DEAD; 1.
DR   Pfam; PF00271; Helicase_C; 1.
DR   Pfam; PF08482; HrpB_C; 1.
DR   PIRSF; PIRSF005496; ATP_hel_hrpB; 1.
DR   SMART; SM00487; DEXDc; 1.
DR   SMART; SM00847; HA2; 1.
DR   SMART; SM00490; HELICc; 1.
DR   SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR   PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR   PROSITE; PS51194; HELICASE_CTER; 1.
PE   4: Predicted;
KW   ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW   Helicase {ECO:0000256|ARBA:ARBA00022806, ECO:0000313|EMBL:ABE56441.1};
KW   Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW   Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001982}.
FT   DOMAIN          14..177
FT                   /note="Helicase ATP-binding"
FT                   /evidence="ECO:0000259|PROSITE:PS51192"
FT   DOMAIN          213..380
FT                   /note="Helicase C-terminal"
FT                   /evidence="ECO:0000259|PROSITE:PS51194"
SQ   SEQUENCE   850 AA;  93148 MW;  7993079B9E25E861 CRC64;
     MSSLPIADLF AALRQKLTSH KQIIIEAPTG AGKSTALPLE MLGWPEITGR ILMLEPRRVA
     TRSVAQFIAK QLNQAVGETV GYRVRGESKV SRHTRLEIVT EGILTRMIQD DPELTGIDII
     IFDEIHERHL TTDLGLALAL EVQQSLRDDL RLIAMSATLT GLPLEGLMPE AAKLISLGRS
     FKVDIEYRPV PSQQQWLDYM GRVIVELLTN PIDHKQANSE VFQGGLLAFL PGKGEIQRLA
     SVLSQRLDPL MFQVCPLYGE LSPAEQDKAI SPAKAGVRKV VLATNVAESS LTISDITLVV
     DSGYKRGASF NPRTGVTRLG LKRISQASAV QRSGRAGRVA QGFGIRLWSQ EEQGRLLAAD
     EAEIATAELV SMALECAAWG VSDCEKLPLL SAPPAVHEQL SWQLLQRLEL VDEGKKITAL
     GQAAHALGCH PRLGHMLLKA KAISATQSID SASDFSNLAC LLAAIIEARG LPRKGADISG
     YLALATQGSM GQQARNWQRK LALSGSLERA ASQANNSDIS LLLALAFPDR IAKARGKEGF
     LLSNGTGVTL DAADPLSLSP WLVVADFQEN EGRSAGRVYL AAELDMSLFD DELAYLVSKE
     SHCGWDEIKG RFFGENRYRL GHIIVKTQTG QVLDAEGRTA ALIALLREKG LSLVNFDEAV
     IQLQNRVQLA RIFAPEYDWP SMDEAALLAE LEHWLGPYLS EVNNLTKLSK LNLLPLLSSR
     LSWELNQKLE ILAPTHWPMA TGTRAPISYH YQQDGTQNQA QARLSVRLQE AYGLSQSPVL
     FNGKLTVTMA LLSPAQRPLA LTSDLASFWN GPYVDVKKEM RGRYPKHLWP DDPINTVPTK
     FTKKKTPGLN
//