ID Q1ELX3_CAEV Unreviewed; 129 AA.
AC Q1ELX3;
DT 11-JUL-2006, integrated into UniProtKB/TrEMBL.
DT 11-JUL-2006, sequence version 1.
DT 27-MAR-2024, entry version 51.
DE SubName: Full=Pol protein {ECO:0000313|EMBL:CAJ76817.1};
DE Flags: Fragment;
GN Name=pol {ECO:0000313|EMBL:CAJ76817.1};
OS Small ruminant lentivirus.
OC Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes;
OC Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus;
OC Caprine arthritis encephalitis virus.
OX NCBI_TaxID=254355 {ECO:0000313|EMBL:CAJ76817.1};
RN [1] {ECO:0000313|EMBL:CAJ76817.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=G3 {ECO:0000313|EMBL:CAJ76817.1};
RX PubMed=16650487; DOI=10.1016/j.jviromet.2006.03.010;
RA Eltahir Y.M., Dovas C.I., Papanastassopoulou M., Koumbati M., Giadinis N.,
RA Verghese-Nikolakaki S., Koptopoulos G.;
RT "Development of a semi-nested PCR using degenerate primers for the generic
RT detection of small ruminant lentivirus proviral DNA.";
RL J. Virol. Methods 135:240-246(2006).
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DR EMBL; AM230936; CAJ76817.1; -; Genomic_DNA.
DR GO; GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.
DR GO; GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.
DR GO; GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0046718; P:viral entry into host cell; IEA:UniProtKB-KW.
DR Gene3D; 1.10.10.200; -; 1.
DR Gene3D; 2.70.40.10; -; 1.
DR InterPro; IPR029054; dUTPase-like.
DR InterPro; IPR036157; dUTPase-like_sf.
DR InterPro; IPR017856; Integrase-like_N.
DR InterPro; IPR003308; Integrase_Zn-bd_dom_N.
DR Pfam; PF00692; dUTPase; 1.
DR Pfam; PF02022; Integrase_Zn; 1.
DR SUPFAM; SSF51283; dUTPase-like; 1.
DR SUPFAM; SSF46919; N-terminal Zn binding domain of HIV integrase; 1.
DR PROSITE; PS50876; ZF_INTEGRASE; 1.
PE 4: Predicted;
KW Aspartyl protease {ECO:0000256|ARBA:ARBA00022750};
KW Endonuclease {ECO:0000256|ARBA:ARBA00022759};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695};
KW Protease {ECO:0000256|ARBA:ARBA00022750};
KW RNA-directed DNA polymerase {ECO:0000256|ARBA:ARBA00022918};
KW Transferase {ECO:0000256|ARBA:ARBA00022679};
KW Virus entry into host cell {ECO:0000256|ARBA:ARBA00023296};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00450};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00450}.
FT DOMAIN 64..105
FT /note="Integrase-type"
FT /evidence="ECO:0000259|PROSITE:PS50876"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:CAJ76817.1"
FT NON_TER 129
FT /evidence="ECO:0000313|EMBL:CAJ76817.1"
SQ SEQUENCE 129 AA; 14673 MW; 92183DC066B5FE2D CRC64;
GYQGIIQVIV FNSNRWEVVI PAGRKFAQLI IMPLVHEELE PWGETRKTER GRQGFGSTGA
YWIENIPAAE EDHEKWHQDA LSLHLAYGIP RAAAEDIVQQ CDTCQENKMP STARGGNKRG
IDHWQVDYT
//
