ID Q1GEC1_RUEST Unreviewed; 761 AA.
AC Q1GEC1;
DT 27-JUN-2006, integrated into UniProtKB/TrEMBL.
DT 27-JUN-2006, sequence version 1.
DT 27-MAR-2024, entry version 86.
DE RecName: Full=Pectate lyase superfamily protein domain-containing protein {ECO:0000259|Pfam:PF12708};
GN OrderedLocusNames=TM1040_2263 {ECO:0000313|EMBL:ABF64995.1};
OS Ruegeria sp. (strain TM1040) (Silicibacter sp.).
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
OC Roseobacteraceae; Ruegeria.
OX NCBI_TaxID=292414 {ECO:0000313|EMBL:ABF64995.1, ECO:0000313|Proteomes:UP000000636};
RN [1] {ECO:0000313|Proteomes:UP000000636}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=TM1040 {ECO:0000313|Proteomes:UP000000636};
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S.,
RA Brettin T., Bruce D., Han C., Tapia R., Goodwin L., Thompson L.S.,
RA Gilna P., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E.,
RA Belas R., Moran M.A., Buchan A., Gonzalez J.M., Schell M.A., Sun F.,
RA Richardson P.;
RT "Complete sequence of chromosome of Silicibacter sp. TM1040.";
RL Submitted (MAY-2006) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:ABF64995.1, ECO:0000313|Proteomes:UP000000636}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=TM1040 {ECO:0000313|EMBL:ABF64995.1,
RC ECO:0000313|Proteomes:UP000000636};
RX PubMed=17526795; DOI=10.1128/AEM.02580-06;
RA Moran M.A., Belas R., Schell M.A., Gonzalez J.M., Sun F., Sun S.,
RA Binder B.J., Edmonds J., Ye W., Orcutt B., Howard E.C., Meile C.,
RA Palefsky W., Goesmann A., Ren Q., Paulsen I., Ulrich L.E., Thompson L.S.,
RA Saunders E., Buchan A.;
RT "Ecological genomics of marine Roseobacters.";
RL Appl. Environ. Microbiol. 73:4559-4569(2007).
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DR EMBL; CP000377; ABF64995.1; -; Genomic_DNA.
DR RefSeq; WP_011539584.1; NC_008044.1.
DR AlphaFoldDB; Q1GEC1; -.
DR STRING; 292414.TM1040_2263; -.
DR KEGG; sit:TM1040_2263; -.
DR eggNOG; COG5434; Bacteria.
DR HOGENOM; CLU_020982_0_0_5; -.
DR OrthoDB; 7749009at2; -.
DR Proteomes; UP000000636; Chromosome.
DR Gene3D; 2.160.20.10; Single-stranded right-handed beta-helix, Pectin lyase-like; 1.
DR InterPro; IPR024535; Pectate_lyase_SF_prot.
DR InterPro; IPR012334; Pectin_lyas_fold.
DR InterPro; IPR011050; Pectin_lyase_fold/virulence.
DR Pfam; PF12708; Pectate_lyase_3; 1.
DR SUPFAM; SSF51126; Pectin lyase-like; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000000636}.
FT DOMAIN 189..243
FT /note="Pectate lyase superfamily protein"
FT /evidence="ECO:0000259|Pfam:PF12708"
SQ SEQUENCE 761 AA; 81066 MW; D532777D4B76D100 CRC64;
MNKAITDGLQ LMPPAFSQGL GVWSSGDGTP GSDTYDGAAN AALVAGDADF GGCLELQKTD
STQRLRYMGE TPILPGCYLR VTARVKAMSG ALPTVRIAGW AGAANNSHVS GVIESGPGTT
LSAYGEVVEV QAIVGTGSRS GVDMPWGLDA AYGHLGLNLT GANGGVIRVD DFVIEDITSV
FLRDMLSVVD VTDFGAVGDG AADCHAAFEA ADDAANGRRI LVPDGEFRIN STLSLNHDVI
FEGTLSMPDN AMLLLTKSYD YPTYAAAFGD EELAFKKAFQ ALLNSVDHES LDLGGRSIAL
SGPIDMQAAV PNRTSYATRR YIRNGQFAAQ AGAAWDHNVI TAQATYSASD KKTLTNVANI
SAIPVGALVE GAGVGREVYV TAKNLGASRL TLSQPLYDAE GTQNFTFTAF KYMLDFSGFS
SLKKFGISGV EFQCNGVASA LRLSPAGTVF ALHDCFFTRP SARGITSIGS GCQGMLVDNC
QFLSDEDAAD VADRETIALN VNSNDVKLRH NRATRFLHWA VMAGSNHTVT GNHFFQGDSV
AGGIRTAGIV VTDTYASHTI SENYIDNCFI EWTNEYDANP DFNGGFSFAA MSITDNVFLS
GDVASWFSYI VIKPYGSGHF LNGVSVTGNK FRSINGTIDR AERVDTSFAD LDFSRAKDVF
FDANSFHNVT TQSRNPLRVE FDQNTAASTW TIATGGALPF DGHSRAVDAV IVEGSLRNSG
GSVVYPGHYV RTQEGGSNNK IDLVWEQAVR GTVRTLIRID R
//
