ID Q1GUL0_SPHAL Unreviewed; 462 AA.
AC Q1GUL0;
DT 27-JUN-2006, integrated into UniProtKB/TrEMBL.
DT 27-JUN-2006, sequence version 1.
DT 27-MAR-2024, entry version 88.
DE SubName: Full=Transcriptional regulator, XRE family {ECO:0000313|EMBL:ABF52662.1};
GN OrderedLocusNames=Sala_0944 {ECO:0000313|EMBL:ABF52662.1};
OS Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256)
OS (Sphingomonas alaskensis).
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC Sphingomonadaceae; Sphingopyxis.
OX NCBI_TaxID=317655 {ECO:0000313|EMBL:ABF52662.1, ECO:0000313|Proteomes:UP000006578};
RN [1] {ECO:0000313|EMBL:ABF52662.1, ECO:0000313|Proteomes:UP000006578}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 13593 / LMG 18877 / RB2256
RC {ECO:0000313|Proteomes:UP000006578};
RX PubMed=19805210; DOI=10.1073/pnas.0903507106;
RA Lauro F.M., McDougald D., Thomas T., Williams T.J., Egan S., Rice S.,
RA DeMaere M.Z., Ting L., Ertan H., Johnson J., Ferriera S., Lapidus A.,
RA Anderson I., Kyrpides N., Munk A.C., Detter C., Han C.S., Brown M.V.,
RA Robb F.T., Kjelleberg S., Cavicchioli R.;
RT "The genomic basis of trophic strategy in marine bacteria.";
RL Proc. Natl. Acad. Sci. U.S.A. 106:15527-15533(2009).
CC -!- SIMILARITY: Belongs to the short-chain fatty acyl-CoA assimilation
CC regulator (ScfR) family. {ECO:0000256|ARBA:ARBA00007227}.
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DR EMBL; CP000356; ABF52662.1; -; Genomic_DNA.
DR RefSeq; WP_011541250.1; NC_008048.1.
DR AlphaFoldDB; Q1GUL0; -.
DR STRING; 317655.Sala_0944; -.
DR KEGG; sal:Sala_0944; -.
DR eggNOG; COG1396; Bacteria.
DR eggNOG; COG3800; Bacteria.
DR HOGENOM; CLU_046383_0_0_5; -.
DR OrthoDB; 1123084at2; -.
DR Proteomes; UP000006578; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00093; HTH_XRE; 1.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR001387; Cro/C1-type_HTH.
DR InterPro; IPR026281; HTH_RamB.
DR InterPro; IPR010359; IrrE_HExxH.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR InterPro; IPR018653; ScfR_C.
DR PANTHER; PTHR46797; HTH-TYPE TRANSCRIPTIONAL REGULATOR; 1.
DR PANTHER; PTHR46797:SF23; HTH-TYPE TRANSCRIPTIONAL REGULATOR PRPR; 1.
DR Pfam; PF01381; HTH_3; 1.
DR Pfam; PF06114; Peptidase_M78; 1.
DR Pfam; PF09856; ScfRs; 1.
DR PIRSF; PIRSF019251; Rv0465c; 1.
DR SMART; SM00530; HTH_XRE; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR PROSITE; PS50943; HTH_CROC1; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000006578};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 12..66
FT /note="HTH cro/C1-type"
FT /evidence="ECO:0000259|PROSITE:PS50943"
SQ SEQUENCE 462 AA; 49858 MW; E8F490650750670E CRC64;
MIERRVFAGP AVRRARRAAG MTQAAMADAL DISPSYLNLI ENGQRPLSAT VLVKLAERFA
FDAATLGGEA VAGGAAGLKR RIADPRFADL GIGADEVEAW LQTAPATAAA FARLFDAAPE
AAAEGDGDAP EVAAVRRAIE KWRNHFADLD ARAEELADEL RLAGGDLYGT ISERLRTRHQ
LGIRILPSDV MPDRLRWLDW HARQLMLSEL LRPASRTFQA AATLAQIEAK GEIDALVAGA
EFAEAAAARL FERHLIHYFA AALMMPYGRF LRACDATGYD LLLLQRRFGA GFEQVAHRLT
TLQRVGARGL PFFMLRIDRA GQGSKRYAGA SQSPLTDGDA RCPLWGIHEA FARPGEVIAD
LVELEDGTRW FTQSRSVAAP GATGSGTPAR FAVCVGVDAK VAAPLIAARG IDLMRSPATP
IGLGCRRCTR TGCVQRSMPP RGRPLRFRDG ERGVSAFDFA GD
//
