ID Q1JRJ7_9POTV Unreviewed; 542 AA.
AC Q1JRJ7;
DT 13-JUN-2006, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2006, sequence version 1.
DT 27-MAR-2024, entry version 73.
DE RecName: Full=Genome polyprotein {ECO:0000256|ARBA:ARBA00020107};
DE Flags: Fragment;
OS Plum pox virus.
OC Viruses; Riboviria; Orthornavirae; Pisuviricota; Stelpaviricetes;
OC Patatavirales; Potyviridae; Potyvirus.
OX NCBI_TaxID=12211 {ECO:0000313|EMBL:CAJ98534.1};
RN [1] {ECO:0000313|EMBL:CAJ98534.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=PPV-Troy5 {ECO:0000313|EMBL:CAJ98534.1};
RA Szathmary E., Dragojszki K., Hrisztova D., Stoev A., Tobias I.,
RA Palkovics L.;
RT "Molecular characterization of some Plum pox virus isolates originated from
RT Troyan region (Bulgaria).";
RL Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Involved in aphid transmission, cell-to-cell and systemis
CC movement, encapsidation of the viral RNA and in the regulation of viral
CC RNA amplification. {ECO:0000256|ARBA:ARBA00029405}.
CC -!- SUBCELLULAR LOCATION: Virion {ECO:0000256|ARBA:ARBA00004328}.
CC -!- SIMILARITY: Belongs to the potyviridae genome polyprotein family.
CC {ECO:0000256|ARBA:ARBA00006064, ECO:0000256|RuleBase:RU003351}.
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DR EMBL; AM260936; CAJ98534.1; -; Genomic_RNA.
DR GO; GO:0019028; C:viral capsid; IEA:UniProtKB-KW.
DR GO; GO:0000166; F:nucleotide binding; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0003968; F:RNA-dependent RNA polymerase activity; IEA:UniProtKB-KW.
DR GO; GO:0006351; P:DNA-templated transcription; IEA:InterPro.
DR GO; GO:0039694; P:viral RNA genome replication; IEA:InterPro.
DR Gene3D; 3.30.70.270; -; 1.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR001592; Poty_coat.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR InterPro; IPR001205; RNA-dir_pol_C.
DR InterPro; IPR007094; RNA-dir_pol_PSvirus.
DR Pfam; PF00767; Poty_coat; 1.
DR Pfam; PF00680; RdRP_1; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR PROSITE; PS50507; RDRP_SSRNA_POS; 1.
PE 3: Inferred from homology;
KW Capsid protein {ECO:0000313|EMBL:CAJ98534.1};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695};
KW RNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022484};
KW Transferase {ECO:0000256|ARBA:ARBA00022679};
KW Viral RNA replication {ECO:0000256|ARBA:ARBA00022953};
KW Virion {ECO:0000256|ARBA:ARBA00022844}.
FT DOMAIN 1..60
FT /note="RdRp catalytic"
FT /evidence="ECO:0000259|PROSITE:PS50507"
FT REGION 285..307
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 285..304
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:CAJ98534.1"
SQ SEQUENCE 542 AA; 60992 MW; FB061BE9993C2CAD CRC64;
GNNSGQPSTV VDNTLMVILA MTYSLLKLGY HPDTHDCICR YFVNGDDLVL AVHPAYESIY
DELQEHFSQL GLNYTFATKT ENKEELWFMS HKGVLYDGMY IPKLEPERIV SILEWDRSNE
PIHRLEAICA SMVEAWGYKE LLREIRKFYS WVLEQAPYNA LSKDGKAPYI AETALKKLYT
DSEASETEIE RYLEAFYNDI DDSLDSNIVI HQADEKEDNE EVDAGKPTVV TAPAATVATT
QPAPVIQPAI QTTTPMFNPI FTPATTQPAI RPVSPISRAT PQSFGVYGNE DASPSTSNTL
VNTGRDRDVD AGSIGTFAVP RLKTMTSKLS LPKVKGKAIM NLNHLAHYSP AQVDLSNTRA
PQSCFQTWYE GVKRDYDVTD EEMSIILNGL MVWCIENGTS PNINGMWVMM DGETQGEYPI
KPLLDPAKPT FRQIMAHFSN VAEAYIEKRN YEKAYMPRYG IQRNLTDYSL ARYAFDFYEM
TSTTPVRARE AHIQMKAAAL RNVQNRLFGL DGNVGTQEED TERHPAGDVN RNMHNLLGVR
GV
//
