ID Q1JUI4_9CRUS Unreviewed; 668 AA.
AC Q1JUI4;
DT 13-JUN-2006, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2006, sequence version 1.
DT 27-MAR-2024, entry version 91.
DE SubName: Full=Aryl hydrocarbon receptor nuclear translocator {ECO:0000313|EMBL:KZS08271.1};
DE SubName: Full=Aryl hydrocarbone receptor nuclear translocator {ECO:0000313|EMBL:BAE94239.1};
GN Name=DmagArnt2 {ECO:0000313|EMBL:BAE94239.1};
GN ORFNames=APZ42_027802 {ECO:0000313|EMBL:KZS08271.1};
OS Daphnia magna.
OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Branchiopoda;
OC Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia.
OX NCBI_TaxID=35525 {ECO:0000313|EMBL:BAE94239.1};
RN [1] {ECO:0000313|EMBL:BAE94239.1}
RP NUCLEOTIDE SEQUENCE.
RX PubMed=16766139; DOI=10.1016/j.gene.2006.03.022;
RA Tokishita S., Kimura S., Mandokora Y., Kato K., Shiga Y., Takahashi Y.,
RA Ohta T., Yamagata H.;
RT "Tissue-specific expression of a bHLH-PAS protein homologous to ARNT during
RT the development of crustacean Daphnia magna.";
RL Gene 376:231-239(2006).
RN [2] {ECO:0000313|EMBL:KZS08271.1, ECO:0000313|Proteomes:UP000076858}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Xinb3 {ECO:0000313|EMBL:KZS08271.1,
RC ECO:0000313|Proteomes:UP000076858};
RC TISSUE=Complete organism {ECO:0000313|EMBL:KZS08271.1};
RA Gilbert D.G., Choi J.-H., Mockaitis K., Colbourne J., Pfrender M.;
RT "EvidentialGene: Evidence-directed Construction of Genes on Genomes.";
RL Submitted (MAR-2016) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; AB242866; BAE94239.1; -; mRNA.
DR EMBL; LRGB01002251; KZS08271.1; -; Genomic_DNA.
DR AlphaFoldDB; Q1JUI4; -.
DR SMR; Q1JUI4; -.
DR STRING; 35525.Q1JUI4; -.
DR EnsemblMetazoa; XM_032925071.2; XP_032780962.1; LOC116919161.
DR Proteomes; UP000076858; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:InterPro.
DR GO; GO:0005634; C:nucleus; IEA:InterPro.
DR GO; GO:0005667; C:transcription regulator complex; IEA:InterPro.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR GO; GO:0045944; P:positive regulation of transcription by RNA polymerase II; IEA:UniProt.
DR CDD; cd18947; bHLH-PAS_ARNT; 1.
DR CDD; cd00130; PAS; 2.
DR Gene3D; 4.10.280.10; Helix-loop-helix DNA-binding domain; 1.
DR Gene3D; 3.30.450.20; PAS domain; 2.
DR InterPro; IPR011598; bHLH_dom.
DR InterPro; IPR036638; HLH_DNA-bd_sf.
DR InterPro; IPR001067; Nuc_translocat.
DR InterPro; IPR001610; PAC.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR013767; PAS_fold.
DR NCBIfam; TIGR00229; sensory_box; 1.
DR PANTHER; PTHR23042:SF76; ARYL HYDROCARBON RECEPTOR NUCLEAR TRANSLOCATOR HOMOLOG; 1.
DR PANTHER; PTHR23042; CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS; 1.
DR Pfam; PF00010; HLH; 1.
DR Pfam; PF00989; PAS; 1.
DR Pfam; PF14598; PAS_11; 1.
DR PRINTS; PR00785; NCTRNSLOCATR.
DR SMART; SM00353; HLH; 1.
DR SMART; SM00086; PAC; 1.
DR SMART; SM00091; PAS; 2.
DR SUPFAM; SSF47459; HLH, helix-loop-helix DNA-binding domain; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 2.
DR PROSITE; PS50888; BHLH; 1.
DR PROSITE; PS50112; PAS; 2.
PE 2: Evidence at transcript level;
KW Receptor {ECO:0000313|EMBL:BAE94239.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000076858};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT DOMAIN 50..103
FT /note="BHLH"
FT /evidence="ECO:0000259|PROSITE:PS50888"
FT DOMAIN 122..186
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 319..380
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT REGION 10..54
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 479..636
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 33..54
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 482..549
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 562..614
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 668 AA; 71861 MW; 3A7576F90ACBC02E CRC64;
MDIHLAGLHQ LSGSDCRQKR QPDSLGSDDE GSTSKFGRME DDNMQDKERF ARENHCEIER
RRRNKMTAYI TELSDMVPTC SALARKPDKL TILRMAVAHM KALRGTGNTS ADGTYKPSFL
TDQELKHLIL EAADGFLFVS ACDTGRLIYV SDSVTPVLHQ GQSDWFGSCL YDHLHPDDVD
KVREQLSTQE PPNAGRILDL KTGTVKKEGH QSSMRLCMGS RRGFICRMRL GQVSPDPLTS
PPGPLHRLRQ RSALGPSRDG HHYAVVHCTG YIKNWPPSGV PMDRGVDDDS HSGSHCCLVA
IGRLQVTSTP NTSDLVGSNS AAEFISRHSA DGKFTFVDQR ALNLLGYSPP ELLGKICFDF
FHPEDVSHMK ESFEQVLKLK GQVMSVMYRF RSKSRDWIWL RTSAFAFLNP YTDEVEYIVC
TNTSAKSLHH TGDASVSGEV TGTVVDSAAV GAASSGLVAA YGHASQDYGR NAREVYHAQS
LSEGQGRPNS NQTMYNPSAA TSSQYETTTA QSVEGPSNSV LNRLPSGGST KQTPSPTASA
GSGAWSTHAT APGYSAYEGI SPSRSPGGSS GPTYTQLGSS AATGRAGYHQ SSGLWHWQSP
VVPPAESSPN NGGPTGGGGA GGGVGVPTTS SANHPAQGSE LVTDMLQMLD HSGTSGFEDL
NMFSSNFE
//
