ID Q1K526_NEUCR Unreviewed; 761 AA.
AC Q1K526;
DT 28-JUN-2011, integrated into UniProtKB/TrEMBL.
DT 28-JUN-2011, sequence version 1.
DT 24-JAN-2024, entry version 48.
DE RecName: Full=Mitochondrial group I intron splicing factor CCM1 {ECO:0000256|ARBA:ARBA00019650};
GN ORFNames=NCU03342 {ECO:0000313|EMBL:EAA27215.1};
OS Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 /
OS FGSC 987).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes;
OC Sordariomycetidae; Sordariales; Sordariaceae; Neurospora.
OX NCBI_TaxID=367110 {ECO:0000313|EMBL:EAA27215.1, ECO:0000313|Proteomes:UP000001805};
RN [1] {ECO:0000313|EMBL:EAA27215.1, ECO:0000313|Proteomes:UP000001805}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987
RC {ECO:0000313|Proteomes:UP000001805};
RX PubMed=12712197; DOI=10.1038/nature01554;
RA Galagan J.E., Calvo S.E., Borkovich K.A., Selker E.U., Read N.D., Jaffe D.,
RA FitzHugh W., Ma L.J., Smirnov S., Purcell S., Rehman B., Elkins T.,
RA Engels R., Wang S., Nielsen C.B., Butler J., Endrizzi M., Qui D.,
RA Ianakiev P., Bell-Pedersen D., Nelson M.A., Werner-Washburne M.,
RA Selitrennikoff C.P., Kinsey J.A., Braun E.L., Zelter A., Schulte U.,
RA Kothe G.O., Jedd G., Mewes W., Staben C., Marcotte E., Greenberg D.,
RA Roy A., Foley K., Naylor J., Stange-Thomann N., Barrett R., Gnerre S.,
RA Kamal M., Kamvysselis M., Mauceli E., Bielke C., Rudd S., Frishman D.,
RA Krystofova S., Rasmussen C., Metzenberg R.L., Perkins D.D., Kroken S.,
RA Cogoni C., Macino G., Catcheside D., Li W., Pratt R.J., Osmani S.A.,
RA DeSouza C.P., Glass L., Orbach M.J., Berglund J.A., Voelker R., Yarden O.,
RA Plamann M., Seiler S., Dunlap J., Radford A., Aramayo R., Natvig D.O.,
RA Alex L.A., Mannhaupt G., Ebbole D.J., Freitag M., Paulsen I., Sachs M.S.,
RA Lander E.S., Nusbaum C., Birren B.;
RT "The genome sequence of the filamentous fungus Neurospora crassa.";
RL Nature 422:859-868(2003).
CC -!- FUNCTION: RNA-binding protein involved in the specific removal of group
CC I introns in mitochondrial encoded transcripts. Maintains the stability
CC of the small subunit mitochondrial 15S rRNA and thus the expression of
CC the mitochondrial genome. {ECO:0000256|ARBA:ARBA00024866}.
CC -!- SIMILARITY: Belongs to the CCM1 family.
CC {ECO:0000256|ARBA:ARBA00006192}.
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DR EMBL; CM002237; EAA27215.1; -; Genomic_DNA.
DR RefSeq; XP_956451.1; XM_951358.2.
DR AlphaFoldDB; Q1K526; -.
DR STRING; 367110.Q1K526; -.
DR PaxDb; 5141-EFNCRP00000002579; -.
DR EnsemblFungi; EAA27215; EAA27215; NCU03342.
DR GeneID; 3872589; -.
DR KEGG; ncr:NCU03342; -.
DR VEuPathDB; FungiDB:NCU03342; -.
DR HOGENOM; CLU_012630_1_1_1; -.
DR InParanoid; Q1K526; -.
DR OMA; QWNYALA; -.
DR OrthoDB; 1899993at2759; -.
DR Proteomes; UP000001805; Chromosome 6, Linkage Group II.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR GO; GO:0006397; P:mRNA processing; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 1.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 1.
DR PANTHER; PTHR47934:SF6; MITOCHONDRIAL GROUP I INTRON SPLICING FACTOR CCM1-RELATED; 1.
DR PANTHER; PTHR47934; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN PET309, MITOCHONDRIAL; 1.
DR Pfam; PF01535; PPR; 2.
DR PROSITE; PS51375; PPR; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000001805}.
FT REPEAT 400..434
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REGION 156..175
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 181..203
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 181..202
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 761 AA; 85124 MW; 6152B1BE5756996A CRC64;
MKVSSRFEGS ICGTIFLHRP SWNWSAIAAS ATAIAATSSV SQTTASIQLG DQGSGRRRQV
ATAGLGPVQQ RRCFHGSWSS QSGGLVDGVA RRPIGGSTGC PLLTTPSLRV TPTSLSGTNS
RRALDSNFFR YSVSAPQKRS HTAAAAAAAA PVPDPVAAAA PEPSADQKPA DSVFSAPSAL
HDDLSTESHS GANPQSQELP ESHSAKLGHL TKEELLELVD PYHDLDGTVE DYLKFIRDPY
MHNYAPADRP RFTFVQNEDD YEYPGPDEVV GLDEFGQHTL SDLRFAVLVR LRTPHKVDLD
TIYDLYQQLP EPRMPYINGR LRHQLLKALG QPQRRNSKSM LRYFAVIADV RNCSMPLTAG
EWNCAISFAS RYVGTVTETQ AQSAMRLWRE MEVDAGIKAT EVTFNILFDV ASKAGNFTLA
EMIYQEMVSR GHYFNRYHHV SLIHFFGLKR ETGGLRAAFR EMVEAGEMID TVVLNAVISG
LLRSGEEAAA ERIYARMVAS IAKWSEVSFP TRSYASDRAI TQALKMMARV AKKAPELQHS
FQEMVPMHPN LRTYSILVKY YGVRCGDLSR VAKYIDDMKL FDIPVHGSIF KVLFRAFDRH
GGYATSAWSA RRLESIYSAL LEAIDAGRTL IHDSAPPPVD EAAFTDDQAQ ETQFHEPVQV
QQDHIQEEHL PDIYDDEAEL PFEEEEYQQK KEWGVDRPGI EIKTWLAIWV LRAFMRCTNG
DRVVEVYDQL RARWELSDKD ELFMADFLSS LLINGSRRGK W
//