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Database: UniProt
Entry: Q1K526_NEUCR
LinkDB: Q1K526_NEUCR
Original site: Q1K526_NEUCR 
ID   Q1K526_NEUCR            Unreviewed;       761 AA.
AC   Q1K526;
DT   28-JUN-2011, integrated into UniProtKB/TrEMBL.
DT   28-JUN-2011, sequence version 1.
DT   24-JAN-2024, entry version 48.
DE   RecName: Full=Mitochondrial group I intron splicing factor CCM1 {ECO:0000256|ARBA:ARBA00019650};
GN   ORFNames=NCU03342 {ECO:0000313|EMBL:EAA27215.1};
OS   Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 /
OS   FGSC 987).
OC   Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes;
OC   Sordariomycetidae; Sordariales; Sordariaceae; Neurospora.
OX   NCBI_TaxID=367110 {ECO:0000313|EMBL:EAA27215.1, ECO:0000313|Proteomes:UP000001805};
RN   [1] {ECO:0000313|EMBL:EAA27215.1, ECO:0000313|Proteomes:UP000001805}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987
RC   {ECO:0000313|Proteomes:UP000001805};
RX   PubMed=12712197; DOI=10.1038/nature01554;
RA   Galagan J.E., Calvo S.E., Borkovich K.A., Selker E.U., Read N.D., Jaffe D.,
RA   FitzHugh W., Ma L.J., Smirnov S., Purcell S., Rehman B., Elkins T.,
RA   Engels R., Wang S., Nielsen C.B., Butler J., Endrizzi M., Qui D.,
RA   Ianakiev P., Bell-Pedersen D., Nelson M.A., Werner-Washburne M.,
RA   Selitrennikoff C.P., Kinsey J.A., Braun E.L., Zelter A., Schulte U.,
RA   Kothe G.O., Jedd G., Mewes W., Staben C., Marcotte E., Greenberg D.,
RA   Roy A., Foley K., Naylor J., Stange-Thomann N., Barrett R., Gnerre S.,
RA   Kamal M., Kamvysselis M., Mauceli E., Bielke C., Rudd S., Frishman D.,
RA   Krystofova S., Rasmussen C., Metzenberg R.L., Perkins D.D., Kroken S.,
RA   Cogoni C., Macino G., Catcheside D., Li W., Pratt R.J., Osmani S.A.,
RA   DeSouza C.P., Glass L., Orbach M.J., Berglund J.A., Voelker R., Yarden O.,
RA   Plamann M., Seiler S., Dunlap J., Radford A., Aramayo R., Natvig D.O.,
RA   Alex L.A., Mannhaupt G., Ebbole D.J., Freitag M., Paulsen I., Sachs M.S.,
RA   Lander E.S., Nusbaum C., Birren B.;
RT   "The genome sequence of the filamentous fungus Neurospora crassa.";
RL   Nature 422:859-868(2003).
CC   -!- FUNCTION: RNA-binding protein involved in the specific removal of group
CC       I introns in mitochondrial encoded transcripts. Maintains the stability
CC       of the small subunit mitochondrial 15S rRNA and thus the expression of
CC       the mitochondrial genome. {ECO:0000256|ARBA:ARBA00024866}.
CC   -!- SIMILARITY: Belongs to the CCM1 family.
CC       {ECO:0000256|ARBA:ARBA00006192}.
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DR   EMBL; CM002237; EAA27215.1; -; Genomic_DNA.
DR   RefSeq; XP_956451.1; XM_951358.2.
DR   AlphaFoldDB; Q1K526; -.
DR   STRING; 367110.Q1K526; -.
DR   PaxDb; 5141-EFNCRP00000002579; -.
DR   EnsemblFungi; EAA27215; EAA27215; NCU03342.
DR   GeneID; 3872589; -.
DR   KEGG; ncr:NCU03342; -.
DR   VEuPathDB; FungiDB:NCU03342; -.
DR   HOGENOM; CLU_012630_1_1_1; -.
DR   InParanoid; Q1K526; -.
DR   OMA; QWNYALA; -.
DR   OrthoDB; 1899993at2759; -.
DR   Proteomes; UP000001805; Chromosome 6, Linkage Group II.
DR   GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR   GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR   GO; GO:0006397; P:mRNA processing; IBA:GO_Central.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 1.
DR   InterPro; IPR002885; Pentatricopeptide_rpt.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   NCBIfam; TIGR00756; PPR; 1.
DR   PANTHER; PTHR47934:SF6; MITOCHONDRIAL GROUP I INTRON SPLICING FACTOR CCM1-RELATED; 1.
DR   PANTHER; PTHR47934; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN PET309, MITOCHONDRIAL; 1.
DR   Pfam; PF01535; PPR; 2.
DR   PROSITE; PS51375; PPR; 1.
PE   3: Inferred from homology;
KW   Reference proteome {ECO:0000313|Proteomes:UP000001805}.
FT   REPEAT          400..434
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REGION          156..175
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          181..203
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        181..202
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   761 AA;  85124 MW;  6152B1BE5756996A CRC64;
     MKVSSRFEGS ICGTIFLHRP SWNWSAIAAS ATAIAATSSV SQTTASIQLG DQGSGRRRQV
     ATAGLGPVQQ RRCFHGSWSS QSGGLVDGVA RRPIGGSTGC PLLTTPSLRV TPTSLSGTNS
     RRALDSNFFR YSVSAPQKRS HTAAAAAAAA PVPDPVAAAA PEPSADQKPA DSVFSAPSAL
     HDDLSTESHS GANPQSQELP ESHSAKLGHL TKEELLELVD PYHDLDGTVE DYLKFIRDPY
     MHNYAPADRP RFTFVQNEDD YEYPGPDEVV GLDEFGQHTL SDLRFAVLVR LRTPHKVDLD
     TIYDLYQQLP EPRMPYINGR LRHQLLKALG QPQRRNSKSM LRYFAVIADV RNCSMPLTAG
     EWNCAISFAS RYVGTVTETQ AQSAMRLWRE MEVDAGIKAT EVTFNILFDV ASKAGNFTLA
     EMIYQEMVSR GHYFNRYHHV SLIHFFGLKR ETGGLRAAFR EMVEAGEMID TVVLNAVISG
     LLRSGEEAAA ERIYARMVAS IAKWSEVSFP TRSYASDRAI TQALKMMARV AKKAPELQHS
     FQEMVPMHPN LRTYSILVKY YGVRCGDLSR VAKYIDDMKL FDIPVHGSIF KVLFRAFDRH
     GGYATSAWSA RRLESIYSAL LEAIDAGRTL IHDSAPPPVD EAAFTDDQAQ ETQFHEPVQV
     QQDHIQEEHL PDIYDDEAEL PFEEEEYQQK KEWGVDRPGI EIKTWLAIWV LRAFMRCTNG
     DRVVEVYDQL RARWELSDKD ELFMADFLSS LLINGSRRGK W
//
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